Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CEBPZOS (CEBPZ opposite strand)

Identity

Alias_namesCEBPZ-AS1
CEBPZ antisense RNA 1
Other alias
HGNC (Hugo) CEBPZOS
LocusID (NCBI) 100505876
Atlas_Id 61683
Location 2p22.2  [Link to chromosome band 2p22]
Location_base_pair Starts at 37196461 and ends at 37204743 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEBPZOS   49288
Cards
Entrez_Gene (NCBI)CEBPZOS  100505876  CEBPZ opposite strand
AliasesCEBPZ-AS1
GeneCards (Weizmann)CEBPZOS
Ensembl hg19 (Hinxton)ENSG00000218739 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000218739 [Gene_View]  chr2:37196461-37204743 [Contig_View]  CEBPZOS [Vega]
ICGC DataPortalENSG00000218739
TCGA cBioPortalCEBPZOS
AceView (NCBI)CEBPZOS
Genatlas (Paris)CEBPZOS
WikiGenes100505876
SOURCE (Princeton)CEBPZOS
Genetics Home Reference (NIH)CEBPZOS
Genomic and cartography
GoldenPath hg38 (UCSC)CEBPZOS  -     chr2:37196461-37204743 +  2p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEBPZOS  -     2p22.2   [Description]    (hg19-Feb_2009)
EnsemblCEBPZOS - 2p22.2 [CytoView hg19]  CEBPZOS - 2p22.2 [CytoView hg38]
Mapping of homologs : NCBICEBPZOS [Mapview hg19]  CEBPZOS [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK001814 BC017652 BC051746 BC065768 BG109338
RefSeq transcript (Entrez)NM_001322373 NM_001322374 NM_001322375 NM_001322376
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEBPZOS
Cluster EST : UnigeneHs.743972 [ NCBI ]
CGAP (NCI)Hs.743972
Alternative Splicing GalleryENSG00000218739
Gene ExpressionCEBPZOS [ NCBI-GEO ]   CEBPZOS [ EBI - ARRAY_EXPRESS ]   CEBPZOS [ SEEK ]   CEBPZOS [ MEM ]
Gene Expression Viewer (FireBrowse)CEBPZOS [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100505876
GTEX Portal (Tissue expression)CEBPZOS
Protein : pattern, domain, 3D structure
UniProt/SwissProtA8MTT3   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA8MTT3  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA8MTT3
Splice isoforms : SwissVarA8MTT3
PhosPhoSitePlusA8MTT3
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CEBPZOS
DMDM Disease mutations100505876
Blocks (Seattle)CEBPZOS
SuperfamilyA8MTT3
Human Protein AtlasENSG00000218739
Peptide AtlasA8MTT3
Protein Interaction databases
DIP (DOE-UCLA)A8MTT3
IntAct (EBI)A8MTT3
FunCoupENSG00000218739
BioGRIDCEBPZOS
STRING (EMBL)CEBPZOS
ZODIACCEBPZOS
Ontologies - Pathways
QuickGOA8MTT3
Ontology : AmiGOintegral component of membrane  mitochondrial membrane  
Ontology : EGO-EBIintegral component of membrane  mitochondrial membrane  
NDEx NetworkCEBPZOS
Atlas of Cancer Signalling NetworkCEBPZOS
Wikipedia pathwaysCEBPZOS
Orthology - Evolution
OrthoDB100505876
GeneTree (enSembl)ENSG00000218739
Phylogenetic Trees/Animal Genes : TreeFamCEBPZOS
HOVERGENA8MTT3
HOGENOMA8MTT3
Homologs : HomoloGeneCEBPZOS
Homology/Alignments : Family Browser (UCSC)CEBPZOS
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEBPZOS [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEBPZOS
dbVarCEBPZOS
ClinVarCEBPZOS
1000_GenomesCEBPZOS 
Exome Variant ServerCEBPZOS
ExAC (Exome Aggregation Consortium)CEBPZOS (select the gene name)
Genetic variants : HAPMAP100505876
Genomic Variants (DGV)CEBPZOS [DGVbeta]
DECIPHERCEBPZOS [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEBPZOS 
Mutations
ICGC Data PortalCEBPZOS 
TCGA Data PortalCEBPZOS 
Broad Tumor PortalCEBPZOS
OASIS PortalCEBPZOS [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCEBPZOS
BioMutasearch CEBPZOS
DgiDB (Drug Gene Interaction Database)CEBPZOS
DoCM (Curated mutations)CEBPZOS (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEBPZOS (select a term)
intoGenCEBPZOS
Cancer3DCEBPZOS(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCEBPZOS
Genetic Testing Registry CEBPZOS
NextProtA8MTT3 [Medical]
TSGene100505876
GENETestsCEBPZOS
Target ValidationCEBPZOS
Huge Navigator CEBPZOS [HugePedia]
snp3D : Map Gene to Disease100505876
BioCentury BCIQCEBPZOS
ClinGenCEBPZOS
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505876
Clinical trialCEBPZOS
Miscellaneous
canSAR (ICR)CEBPZOS (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEBPZOS
EVEXCEBPZOS
GoPubMedCEBPZOS
iHOPCEBPZOS
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:04:30 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.