Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CECR7 (cat eye syndrome chromosome region, candidate 7 (non-protein coding))

Identity

Alias_namescat eye syndrome chromosome region, candidate 7
Alias_symbol (synonym)SAHL1
Other alias
HGNC (Hugo) CECR7
LocusID (NCBI) 100130418
Atlas_Id 61688
Location 22q11.1  [Link to chromosome band 22q11]
Location_base_pair Starts at 17517460 and ends at 17539682 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CECR7 (22q11.1) / IL17RA (22q11.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CECR7   1845
Cards
Entrez_Gene (NCBI)CECR7  100130418  cat eye syndrome chromosome region, candidate 7 (non-protein coding)
AliasesSAHL1
GeneCards (Weizmann)CECR7
Ensembl hg19 (Hinxton)ENSG00000237438 [Gene_View]  chr22:17517460-17539682 [Contig_View]  CECR7 [Vega]
Ensembl hg38 (Hinxton)ENSG00000237438 [Gene_View]  chr22:17517460-17539682 [Contig_View]  CECR7 [Vega]
ICGC DataPortalENSG00000237438
TCGA cBioPortalCECR7
AceView (NCBI)CECR7
Genatlas (Paris)CECR7
WikiGenes100130418
SOURCE (Princeton)CECR7
Genetics Home Reference (NIH)CECR7
Genomic and cartography
GoldenPath hg19 (UCSC)CECR7  -     chr22:17517460-17539682 +  22q11.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CECR7  -     22q11.1   [Description]    (hg38-Dec_2013)
EnsemblCECR7 - 22q11.1 [CytoView hg19]  CECR7 - 22q11.1 [CytoView hg38]
Mapping of homologs : NCBICECR7 [Mapview hg19]  CECR7 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK098045 AY026052 BC043198 HG511970 HG511971
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_187355 NW_004929429
Consensus coding sequences : CCDS (NCBI)CECR7
Cluster EST : UnigeneHs.660640 [ NCBI ]
CGAP (NCI)Hs.660640
Alternative Splicing GalleryENSG00000237438
Gene ExpressionCECR7 [ NCBI-GEO ]   CECR7 [ EBI - ARRAY_EXPRESS ]   CECR7 [ SEEK ]   CECR7 [ MEM ]
Gene Expression Viewer (FireBrowse)CECR7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100130418
GTEX Portal (Tissue expression)CECR7
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CECR7
DMDM Disease mutations100130418
Blocks (Seattle)CECR7
Human Protein AtlasENSG00000237438
Protein Interaction databases
FunCoupENSG00000237438
BioGRIDCECR7
STRING (EMBL)CECR7
ZODIACCECR7
Ontologies - Pathways
Huge Navigator CECR7 [HugePedia]
snp3D : Map Gene to Disease100130418
BioCentury BCIQCECR7
ClinGenCECR7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100130418
Chemical/Pharm GKB GenePA26388
Clinical trialCECR7
Miscellaneous
canSAR (ICR)CECR7 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCECR7
EVEXCECR7
GoPubMedCECR7
iHOPCECR7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:02 CET 2017

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