Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CELA3A (chymotrypsin like elastase family member 3A)

Identity

Alias_namesELA3A
elastase 3A, pancreatic (protease E)
elastase 3A, pancreatic
chymotrypsin-like elastase family, member 3A
Alias_symbol (synonym)ELA3
Other alias
HGNC (Hugo) CELA3A
LocusID (NCBI) 10136
Atlas_Id 50863
Location 1p36.12  [Link to chromosome band 1p36]
Location_base_pair Starts at 22328149 and ends at 22339035 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CELA3A   15944
Cards
Entrez_Gene (NCBI)CELA3A  10136  chymotrypsin like elastase family member 3A
AliasesELA3; ELA3A
GeneCards (Weizmann)CELA3A
Ensembl hg19 (Hinxton)ENSG00000142789 [Gene_View]  chr1:22328149-22339035 [Contig_View]  CELA3A [Vega]
Ensembl hg38 (Hinxton)ENSG00000142789 [Gene_View]  chr1:22328149-22339035 [Contig_View]  CELA3A [Vega]
ICGC DataPortalENSG00000142789
TCGA cBioPortalCELA3A
AceView (NCBI)CELA3A
Genatlas (Paris)CELA3A
WikiGenes10136
SOURCE (Princeton)CELA3A
Genetics Home Reference (NIH)CELA3A
Genomic and cartography
GoldenPath hg19 (UCSC)CELA3A  -     chr1:22328149-22339035 +  1p36.12   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CELA3A  -     1p36.12   [Description]    (hg38-Dec_2013)
EnsemblCELA3A - 1p36.12 [CytoView hg19]  CELA3A - 1p36.12 [CytoView hg38]
Mapping of homologs : NCBICELA3A [Mapview hg19]  CELA3A [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK225620 AK308510 AK308514 AK308518 AW583482
RefSeq transcript (Entrez)NM_005747
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_032977 NW_004929289
Consensus coding sequences : CCDS (NCBI)CELA3A
Cluster EST : UnigeneHs.181289 [ NCBI ]
CGAP (NCI)Hs.181289
Alternative Splicing GalleryENSG00000142789
Gene ExpressionCELA3A [ NCBI-GEO ]   CELA3A [ EBI - ARRAY_EXPRESS ]   CELA3A [ SEEK ]   CELA3A [ MEM ]
Gene Expression Viewer (FireBrowse)CELA3A [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)10136
GTEX Portal (Tissue expression)CELA3A
Protein : pattern, domain, 3D structure
UniProt/SwissProtP09093   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP09093  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP09093
Splice isoforms : SwissVarP09093
Catalytic activity : Enzyme3.4.21.70 [ Enzyme-Expasy ]   3.4.21.703.4.21.70 [ IntEnz-EBI ]   3.4.21.70 [ BRENDA ]   3.4.21.70 [ KEGG ]   
PhosPhoSitePlusP09093
Domaine pattern : Prosite (Expaxy)TRYPSIN_DOM (PS50240)    TRYPSIN_HIS (PS00134)    TRYPSIN_SER (PS00135)   
Domains : Interpro (EBI)Peptidase_S1_PA    Peptidase_S1A    Trypsin_dom    TRYPSIN_HIS    TRYPSIN_SER   
Domain families : Pfam (Sanger)Trypsin (PF00089)   
Domain families : Pfam (NCBI)pfam00089   
Domain families : Smart (EMBL)Tryp_SPc (SM00020)  
Conserved Domain (NCBI)CELA3A
DMDM Disease mutations10136
Blocks (Seattle)CELA3A
SuperfamilyP09093
Human Protein AtlasENSG00000142789
Peptide AtlasP09093
HPRD06497
IPIIPI00295663   IPI00641555   IPI00477134   IPI00480197   
Protein Interaction databases
DIP (DOE-UCLA)P09093
IntAct (EBI)P09093
FunCoupENSG00000142789
BioGRIDCELA3A
STRING (EMBL)CELA3A
ZODIACCELA3A
Ontologies - Pathways
QuickGOP09093
Ontology : AmiGOserine-type endopeptidase activity  extracellular space  proteolysis  digestion  cholesterol metabolic process  
Ontology : EGO-EBIserine-type endopeptidase activity  extracellular space  proteolysis  digestion  cholesterol metabolic process  
Pathways : KEGGPancreatic secretion    Protein digestion and absorption   
NDEx NetworkCELA3A
Atlas of Cancer Signalling NetworkCELA3A
Wikipedia pathwaysCELA3A
Orthology - Evolution
OrthoDB10136
GeneTree (enSembl)ENSG00000142789
Phylogenetic Trees/Animal Genes : TreeFamCELA3A
HOVERGENP09093
HOGENOMP09093
Homologs : HomoloGeneCELA3A
Homology/Alignments : Family Browser (UCSC)CELA3A
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCELA3A [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CELA3A
dbVarCELA3A
ClinVarCELA3A
1000_GenomesCELA3A 
Exome Variant ServerCELA3A
ExAC (Exome Aggregation Consortium)CELA3A (select the gene name)
Genetic variants : HAPMAP10136
Genomic Variants (DGV)CELA3A [DGVbeta]
DECIPHER (Syndromes)1:22328149-22339035  ENSG00000142789
CONAN: Copy Number AnalysisCELA3A 
Mutations
ICGC Data PortalCELA3A 
TCGA Data PortalCELA3A 
Broad Tumor PortalCELA3A
OASIS PortalCELA3A [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCELA3A  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCELA3A
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CELA3A
DgiDB (Drug Gene Interaction Database)CELA3A
DoCM (Curated mutations)CELA3A (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CELA3A (select a term)
intoGenCELA3A
Cancer3DCELA3A(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCELA3A
Genetic Testing Registry CELA3A
NextProtP09093 [Medical]
TSGene10136
GENETestsCELA3A
Huge Navigator CELA3A [HugePedia]
snp3D : Map Gene to Disease10136
BioCentury BCIQCELA3A
ClinGenCELA3A
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD10136
Chemical/Pharm GKB GenePA27736
Clinical trialCELA3A
Miscellaneous
canSAR (ICR)CELA3A (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCELA3A
EVEXCELA3A
GoPubMedCELA3A
iHOPCELA3A
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:59:56 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.