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CEND1 (cell cycle exit and neuronal differentiation 1)

Identity

Alias_symbol (synonym)FLJ90066
BM88
Other alias
HGNC (Hugo) CEND1
LocusID (NCBI) 51286
Atlas_Id 55992
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 787110 and ends at 790126 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEND1   24153
Cards
Entrez_Gene (NCBI)CEND1  51286  cell cycle exit and neuronal differentiation 1
AliasesBM88
GeneCards (Weizmann)CEND1
Ensembl hg19 (Hinxton)ENSG00000184524 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000184524 [Gene_View]  chr11:787110-790126 [Contig_View]  CEND1 [Vega]
ICGC DataPortalENSG00000184524
TCGA cBioPortalCEND1
AceView (NCBI)CEND1
Genatlas (Paris)CEND1
WikiGenes51286
SOURCE (Princeton)CEND1
Genetics Home Reference (NIH)CEND1
Genomic and cartography
GoldenPath hg38 (UCSC)CEND1  -     chr11:787110-790126 -  11p15.5   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEND1  -     11p15.5   [Description]    (hg19-Feb_2009)
EnsemblCEND1 - 11p15.5 [CytoView hg19]  CEND1 - 11p15.5 [CytoView hg38]
Mapping of homologs : NCBICEND1 [Mapview hg19]  CEND1 [Mapview hg38]
OMIM608213   
Gene and transcription
Genbank (Entrez)AF235030 AK074547 AK312993 BC034732 DA066200
RefSeq transcript (Entrez)NM_016564
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEND1
Cluster EST : UnigeneHs.22140 [ NCBI ]
CGAP (NCI)Hs.22140
Alternative Splicing GalleryENSG00000184524
Gene ExpressionCEND1 [ NCBI-GEO ]   CEND1 [ EBI - ARRAY_EXPRESS ]   CEND1 [ SEEK ]   CEND1 [ MEM ]
Gene Expression Viewer (FireBrowse)CEND1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51286
GTEX Portal (Tissue expression)CEND1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N111   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N111  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N111
Splice isoforms : SwissVarQ8N111
PhosPhoSitePlusQ8N111
Domains : Interpro (EBI)Cend1   
Domain families : Pfam (Sanger)CEND1 (PF15677)   
Domain families : Pfam (NCBI)pfam15677   
Domain structure : Prodom (Prabi Lyon)Cend1 (PD079544)   
Conserved Domain (NCBI)CEND1
DMDM Disease mutations51286
Blocks (Seattle)CEND1
SuperfamilyQ8N111
Human Protein AtlasENSG00000184524
Peptide AtlasQ8N111
HPRD16300
IPIIPI00295601   IPI00979129   
Protein Interaction databases
DIP (DOE-UCLA)Q8N111
IntAct (EBI)Q8N111
FunCoupENSG00000184524
BioGRIDCEND1
STRING (EMBL)CEND1
ZODIACCEND1
Ontologies - Pathways
QuickGOQ8N111
Ontology : AmiGOadult walking behavior  integral component of membrane  cerebellar granular layer maturation  cerebellar Purkinje cell differentiation  radial glia guided migration of cerebellar granule cell  negative regulation of cerebellar granule cell precursor proliferation  
Ontology : EGO-EBIadult walking behavior  integral component of membrane  cerebellar granular layer maturation  cerebellar Purkinje cell differentiation  radial glia guided migration of cerebellar granule cell  negative regulation of cerebellar granule cell precursor proliferation  
NDEx NetworkCEND1
Atlas of Cancer Signalling NetworkCEND1
Wikipedia pathwaysCEND1
Orthology - Evolution
OrthoDB51286
GeneTree (enSembl)ENSG00000184524
Phylogenetic Trees/Animal Genes : TreeFamCEND1
HOVERGENQ8N111
HOGENOMQ8N111
Homologs : HomoloGeneCEND1
Homology/Alignments : Family Browser (UCSC)CEND1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEND1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEND1
dbVarCEND1
ClinVarCEND1
1000_GenomesCEND1 
Exome Variant ServerCEND1
ExAC (Exome Aggregation Consortium)CEND1 (select the gene name)
Genetic variants : HAPMAP51286
Genomic Variants (DGV)CEND1 [DGVbeta]
DECIPHERCEND1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEND1 
Mutations
ICGC Data PortalCEND1 
TCGA Data PortalCEND1 
Broad Tumor PortalCEND1
OASIS PortalCEND1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEND1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEND1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEND1
DgiDB (Drug Gene Interaction Database)CEND1
DoCM (Curated mutations)CEND1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEND1 (select a term)
intoGenCEND1
Cancer3DCEND1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608213   
Orphanet
MedgenCEND1
Genetic Testing Registry CEND1
NextProtQ8N111 [Medical]
TSGene51286
GENETestsCEND1
Huge Navigator CEND1 [HugePedia]
snp3D : Map Gene to Disease51286
BioCentury BCIQCEND1
ClinGenCEND1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51286
Chemical/Pharm GKB GenePA145149163
Clinical trialCEND1
Miscellaneous
canSAR (ICR)CEND1 (select the gene name)
Probes
Litterature
PubMed10 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEND1
EVEXCEND1
GoPubMedCEND1
iHOPCEND1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:10:09 CEST 2017

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