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CENPH (centromere protein H)

Identity

Alias (NCBI)-
HGNC (Hugo) CENPH
LocusID (NCBI) 64946
Atlas_Id 43644
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 69189583 and ends at 69210357 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CENPH (5q13.2)::MGAT5 (2q21.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CENPH   17268
Cards
Entrez_Gene (NCBI)CENPH    centromere protein H
Aliases
GeneCards (Weizmann)CENPH
Ensembl hg19 (Hinxton)ENSG00000153044 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153044 [Gene_View]  ENSG00000153044 [Sequence]  chr5:69189583-69210357 [Contig_View]  CENPH [Vega]
ICGC DataPortalENSG00000153044
TCGA cBioPortalCENPH
AceView (NCBI)CENPH
Genatlas (Paris)CENPH
SOURCE (Princeton)CENPH
Genetics Home Reference (NIH)CENPH
Genomic and cartography
GoldenPath hg38 (UCSC)CENPH  -     chr5:69189583-69210357 +  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CENPH  -     5q13.2   [Description]    (hg19-Feb_2009)
GoldenPathCENPH - 5q13.2 [CytoView hg19]  CENPH - 5q13.2 [CytoView hg38]
ImmunoBaseENSG00000153044
Genome Data Viewer NCBICENPH [Mapview hg19]  
OMIM605607   
Gene and transcription
Genbank (Entrez)AB035124 AK123761 AK290746 BC012024 BC015355
RefSeq transcript (Entrez)NM_022909
Consensus coding sequences : CCDS (NCBI)CENPH
Gene ExpressionCENPH [ NCBI-GEO ]   CENPH [ EBI - ARRAY_EXPRESS ]   CENPH [ SEEK ]   CENPH [ MEM ]
Gene Expression Viewer (FireBrowse)CENPH [ Firebrowse - Broad ]
GenevisibleExpression of CENPH in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)64946
GTEX Portal (Tissue expression)CENPH
Human Protein AtlasENSG00000153044-CENPH [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H3R5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H3R5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H3R5
PhosPhoSitePlusQ9H3R5
Domains : Interpro (EBI)CENP-H    CENP-H_C   
Domain families : Pfam (Sanger)CENP-H (PF05837)   
Domain families : Pfam (NCBI)pfam05837   
Conserved Domain (NCBI)CENPH
SuperfamilyQ9H3R5
AlphaFold pdb e-kbQ9H3R5   
Human Protein Atlas [tissue]ENSG00000153044-CENPH [tissue]
HPRD12029
Protein Interaction databases
DIP (DOE-UCLA)Q9H3R5
IntAct (EBI)Q9H3R5
BioGRIDCENPH
STRING (EMBL)CENPH
ZODIACCENPH
Ontologies - Pathways
QuickGOQ9H3R5
Ontology : AmiGOkinetochore  kinetochore  kinetochore  kinetochore  protein binding  nucleus  nucleus  nucleoplasm  nucleoplasm  chromosome  nucleolus  cytosol  mitotic spindle organization  mitotic spindle organization  chromosome segregation  CENP-A containing nucleosome assembly  kinetochore binding  kinetochore binding  kinetochore assembly  kinetochore organization  
Ontology : EGO-EBIkinetochore  kinetochore  kinetochore  kinetochore  protein binding  nucleus  nucleus  nucleoplasm  nucleoplasm  chromosome  nucleolus  cytosol  mitotic spindle organization  mitotic spindle organization  chromosome segregation  CENP-A containing nucleosome assembly  kinetochore binding  kinetochore binding  kinetochore assembly  kinetochore organization  
NDEx NetworkCENPH
Atlas of Cancer Signalling NetworkCENPH
Wikipedia pathwaysCENPH
Orthology - Evolution
OrthoDB64946
GeneTree (enSembl)ENSG00000153044
Phylogenetic Trees/Animal Genes : TreeFamCENPH
Homologs : HomoloGeneCENPH
Homology/Alignments : Family Browser (UCSC)CENPH
Gene fusions - Rearrangements
Fusion : QuiverCENPH
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCENPH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CENPH
dbVarCENPH
ClinVarCENPH
MonarchCENPH
1000_GenomesCENPH 
Exome Variant ServerCENPH
GNOMAD BrowserENSG00000153044
Varsome BrowserCENPH
ACMGCENPH variants
VarityQ9H3R5
Genomic Variants (DGV)CENPH [DGVbeta]
DECIPHERCENPH [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCENPH 
Mutations
ICGC Data PortalCENPH 
TCGA Data PortalCENPH 
Broad Tumor PortalCENPH
OASIS PortalCENPH [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCENPH  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCENPH
Mutations and Diseases : HGMDCENPH
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCENPH
DgiDB (Drug Gene Interaction Database)CENPH
DoCM (Curated mutations)CENPH
CIViC (Clinical Interpretations of Variants in Cancer)CENPH
Cancer3DCENPH
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM605607   
Orphanet
DisGeNETCENPH
MedgenCENPH
Genetic Testing Registry CENPH
NextProtQ9H3R5 [Medical]
GENETestsCENPH
Target ValidationCENPH
Huge Navigator CENPH [HugePedia]
ClinGenCENPH
Clinical trials, drugs, therapy
MyCancerGenomeCENPH
Protein Interactions : CTDCENPH
Pharm GKB GenePA26402
PharosQ9H3R5
Clinical trialCENPH
Miscellaneous
canSAR (ICR)CENPH
HarmonizomeCENPH
ARCHS4CENPH
DataMed IndexCENPH
Probes
Litterature
PubMed52 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCENPH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jan 17 15:18:37 CET 2022

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