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CENPL (centromere protein L)

Identity

Alias_namesC1orf155
chromosome 1 open reading frame 155
Alias_symbol (synonym)dJ383J4.3
FLJ31044
Other aliasCENP-L
HGNC (Hugo) CENPL
LocusID (NCBI) 91687
Atlas_Id 61706
Location 1q25.1  [Link to chromosome band 1q25]
Location_base_pair Starts at 173768688 and ends at 173793777 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CENPL (1q25.1) / HINT1 (5q23.3)PRRC2C (1q24.3) / CENPL (1q25.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CENPL   17879
Cards
Entrez_Gene (NCBI)CENPL  91687  centromere protein L
AliasesC1orf155; CENP-L; dJ383J4.3
GeneCards (Weizmann)CENPL
Ensembl hg19 (Hinxton)ENSG00000120334 [Gene_View]  chr1:173768688-173793777 [Contig_View]  CENPL [Vega]
Ensembl hg38 (Hinxton)ENSG00000120334 [Gene_View]  chr1:173768688-173793777 [Contig_View]  CENPL [Vega]
ICGC DataPortalENSG00000120334
TCGA cBioPortalCENPL
AceView (NCBI)CENPL
Genatlas (Paris)CENPL
WikiGenes91687
SOURCE (Princeton)CENPL
Genetics Home Reference (NIH)CENPL
Genomic and cartography
GoldenPath hg19 (UCSC)CENPL  -     chr1:173768688-173793777 -  1q25.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CENPL  -     1q25.1   [Description]    (hg38-Dec_2013)
EnsemblCENPL - 1q25.1 [CytoView hg19]  CENPL - 1q25.1 [CytoView hg38]
Mapping of homologs : NCBICENPL [Mapview hg19]  CENPL [Mapview hg38]
OMIM611503   
Gene and transcription
Genbank (Entrez)AK055606 AK056348 BC007071 BC007923 BC019022
RefSeq transcript (Entrez)NM_001127181 NM_001171182 NM_033319
RefSeq genomic (Entrez)NC_000001 NC_018912 NT_004487 NW_004929293
Consensus coding sequences : CCDS (NCBI)CENPL
Cluster EST : UnigeneHs.720473 [ NCBI ]
CGAP (NCI)Hs.720473
Alternative Splicing GalleryENSG00000120334
Gene ExpressionCENPL [ NCBI-GEO ]   CENPL [ EBI - ARRAY_EXPRESS ]   CENPL [ SEEK ]   CENPL [ MEM ]
Gene Expression Viewer (FireBrowse)CENPL [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)91687
GTEX Portal (Tissue expression)CENPL
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8N0S6   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8N0S6  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8N0S6
Splice isoforms : SwissVarQ8N0S6
PhosPhoSitePlusQ8N0S6
Domains : Interpro (EBI)CENP-L   
Domain families : Pfam (Sanger)CENP-L (PF13092)   
Domain families : Pfam (NCBI)pfam13092   
Conserved Domain (NCBI)CENPL
DMDM Disease mutations91687
Blocks (Seattle)CENPL
SuperfamilyQ8N0S6
Human Protein AtlasENSG00000120334
Peptide AtlasQ8N0S6
HPRD15909
IPIIPI00455502   IPI00181166   IPI00784031   IPI00382401   
Protein Interaction databases
DIP (DOE-UCLA)Q8N0S6
IntAct (EBI)Q8N0S6
FunCoupENSG00000120334
BioGRIDCENPL
STRING (EMBL)CENPL
ZODIACCENPL
Ontologies - Pathways
QuickGOQ8N0S6
Ontology : AmiGOmitotic cell cycle  chromosome, centromeric region  protein binding  nucleoplasm  cytosol  nucleosome assembly  small GTPase mediated signal transduction  CENP-A containing nucleosome assembly  
Ontology : EGO-EBImitotic cell cycle  chromosome, centromeric region  protein binding  nucleoplasm  cytosol  nucleosome assembly  small GTPase mediated signal transduction  CENP-A containing nucleosome assembly  
NDEx NetworkCENPL
Atlas of Cancer Signalling NetworkCENPL
Wikipedia pathwaysCENPL
Orthology - Evolution
OrthoDB91687
GeneTree (enSembl)ENSG00000120334
Phylogenetic Trees/Animal Genes : TreeFamCENPL
HOVERGENQ8N0S6
HOGENOMQ8N0S6
Homologs : HomoloGeneCENPL
Homology/Alignments : Family Browser (UCSC)CENPL
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCENPL [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CENPL
dbVarCENPL
ClinVarCENPL
1000_GenomesCENPL 
Exome Variant ServerCENPL
ExAC (Exome Aggregation Consortium)CENPL (select the gene name)
Genetic variants : HAPMAP91687
Genomic Variants (DGV)CENPL [DGVbeta]
DECIPHER (Syndromes)1:173768688-173793777  ENSG00000120334
CONAN: Copy Number AnalysisCENPL 
Mutations
ICGC Data PortalCENPL 
TCGA Data PortalCENPL 
Broad Tumor PortalCENPL
OASIS PortalCENPL [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCENPL  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCENPL
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CENPL
DgiDB (Drug Gene Interaction Database)CENPL
DoCM (Curated mutations)CENPL (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CENPL (select a term)
intoGenCENPL
Cancer3DCENPL(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611503   
Orphanet
MedgenCENPL
Genetic Testing Registry CENPL
NextProtQ8N0S6 [Medical]
TSGene91687
GENETestsCENPL
Huge Navigator CENPL [HugePedia]
snp3D : Map Gene to Disease91687
BioCentury BCIQCENPL
ClinGenCENPL
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD91687
Chemical/Pharm GKB GenePA142672406
Clinical trialCENPL
Miscellaneous
canSAR (ICR)CENPL (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCENPL
EVEXCENPL
GoPubMedCENPL
iHOPCENPL
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:05 CET 2017

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