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CENPP (centromere protein P)

Identity

Alias_symbol (synonym)RP11-19J3.3
CENP-P
Other alias
HGNC (Hugo) CENPP
LocusID (NCBI) 401541
Atlas_Id 61710
Location 9q22.31  [Link to chromosome band 9q22]
Location_base_pair Starts at 92325468 and ends at 92615155 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
ABCA5 (17q24.3) / CENPP (9q22.31)CENPP (9q22.31) / CCSER1 (4q22.1)CENPP (9q22.31) / CENPP (9q22.31)
CENPP (9q22.31) / TTC3 (21q22.13)CENPP (9q22.31) / USP6 (17p13.2)CENPP (9q22.31) / ZNF385B (2q31.2)
CRHR1 (17q21.31) / CENPP (9q22.31)CTDNEP1 (17p13.1) / CENPP (9q22.31)DCAF10 (9p13.2) / CENPP (9q22.31)
LOC100507412 (-) / CENPP (9q22.31)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CENPP   32933
Cards
Entrez_Gene (NCBI)CENPP  401541  centromere protein P
AliasesCENP-P
GeneCards (Weizmann)CENPP
Ensembl hg19 (Hinxton)ENSG00000188312 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000188312 [Gene_View]  chr9:92325468-92615155 [Contig_View]  CENPP [Vega]
ICGC DataPortalENSG00000188312
TCGA cBioPortalCENPP
AceView (NCBI)CENPP
Genatlas (Paris)CENPP
WikiGenes401541
SOURCE (Princeton)CENPP
Genetics Home Reference (NIH)CENPP
Genomic and cartography
GoldenPath hg38 (UCSC)CENPP  -     chr9:92325468-92615155 +  9q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CENPP  -     9q22.31   [Description]    (hg19-Feb_2009)
EnsemblCENPP - 9q22.31 [CytoView hg19]  CENPP - 9q22.31 [CytoView hg38]
Mapping of homologs : NCBICENPP [Mapview hg19]  CENPP [Mapview hg38]
OMIM611505   
Gene and transcription
Genbank (Entrez)AK091247 AK092603 AK307262 AK307435 AL833701
RefSeq transcript (Entrez)NM_001012267 NM_001286969 NM_001286971
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CENPP
Cluster EST : UnigeneHs.713775 [ NCBI ]
CGAP (NCI)Hs.713775
Alternative Splicing GalleryENSG00000188312
Gene ExpressionCENPP [ NCBI-GEO ]   CENPP [ EBI - ARRAY_EXPRESS ]   CENPP [ SEEK ]   CENPP [ MEM ]
Gene Expression Viewer (FireBrowse)CENPP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)401541
GTEX Portal (Tissue expression)CENPP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6IPU0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6IPU0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6IPU0
Splice isoforms : SwissVarQ6IPU0
PhosPhoSitePlusQ6IPU0
Domains : Interpro (EBI)CENP-P   
Domain families : Pfam (Sanger)CENP-P (PF13096)   
Domain families : Pfam (NCBI)pfam13096   
Conserved Domain (NCBI)CENPP
DMDM Disease mutations401541
Blocks (Seattle)CENPP
SuperfamilyQ6IPU0
Human Protein AtlasENSG00000188312
Peptide AtlasQ6IPU0
HPRD17989
IPIIPI00552442   IPI00385340   IPI00643222   
Protein Interaction databases
DIP (DOE-UCLA)Q6IPU0
IntAct (EBI)Q6IPU0
FunCoupENSG00000188312
BioGRIDCENPP
STRING (EMBL)CENPP
ZODIACCENPP
Ontologies - Pathways
QuickGOQ6IPU0
Ontology : AmiGOchromosome, centromeric region  protein binding  nucleus  nucleoplasm  nucleolus  cytosol  sister chromatid cohesion  CENP-A containing nucleosome assembly  
Ontology : EGO-EBIchromosome, centromeric region  protein binding  nucleus  nucleoplasm  nucleolus  cytosol  sister chromatid cohesion  CENP-A containing nucleosome assembly  
NDEx NetworkCENPP
Atlas of Cancer Signalling NetworkCENPP
Wikipedia pathwaysCENPP
Orthology - Evolution
OrthoDB401541
GeneTree (enSembl)ENSG00000188312
Phylogenetic Trees/Animal Genes : TreeFamCENPP
HOVERGENQ6IPU0
HOGENOMQ6IPU0
Homologs : HomoloGeneCENPP
Homology/Alignments : Family Browser (UCSC)CENPP
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCENPP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CENPP
dbVarCENPP
ClinVarCENPP
1000_GenomesCENPP 
Exome Variant ServerCENPP
ExAC (Exome Aggregation Consortium)CENPP (select the gene name)
Genetic variants : HAPMAP401541
Genomic Variants (DGV)CENPP [DGVbeta]
DECIPHERCENPP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCENPP 
Mutations
ICGC Data PortalCENPP 
TCGA Data PortalCENPP 
Broad Tumor PortalCENPP
OASIS PortalCENPP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCENPP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCENPP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CENPP
DgiDB (Drug Gene Interaction Database)CENPP
DoCM (Curated mutations)CENPP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CENPP (select a term)
intoGenCENPP
Cancer3DCENPP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611505   
Orphanet
MedgenCENPP
Genetic Testing Registry CENPP
NextProtQ6IPU0 [Medical]
TSGene401541
GENETestsCENPP
Huge Navigator CENPP [HugePedia]
snp3D : Map Gene to Disease401541
BioCentury BCIQCENPP
ClinGenCENPP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401541
Chemical/Pharm GKB GenePA145149143
Clinical trialCENPP
Miscellaneous
canSAR (ICR)CENPP (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCENPP
EVEXCENPP
GoPubMedCENPP
iHOPCENPP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 11:05:30 CEST 2017

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