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CENPQ (centromere protein Q)

Identity

Alias_namesC6orf139
chromosome 6 open reading frame 139
Alias_symbol (synonym)FLJ10545
CENP-Q
Other alias
HGNC (Hugo) CENPQ
LocusID (NCBI) 55166
Atlas_Id 61711
Location 6p12.3  [Link to chromosome band 6p12]
Location_base_pair Starts at 49463383 and ends at 49493107 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CDYL (6p25.1) / CENPQ (6p12.3)CENPQ (6p12.3) / CENPQ (6p12.3)CENPQ (6p12.3) / MUT (6p12.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


Other Solid tumors implicated (Data extracted from papers in the Atlas) [ 1 ]
  t(6;6)(p12;p12) CENPQ/MUT


External links

Nomenclature
HGNC (Hugo)CENPQ   21347
Cards
Entrez_Gene (NCBI)CENPQ  55166  centromere protein Q
AliasesC6orf139; CENP-Q
GeneCards (Weizmann)CENPQ
Ensembl hg19 (Hinxton)ENSG00000031691 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000031691 [Gene_View]  ENSG00000031691 [Sequence]  chr6:49463383-49493107 [Contig_View]  CENPQ [Vega]
ICGC DataPortalENSG00000031691
TCGA cBioPortalCENPQ
AceView (NCBI)CENPQ
Genatlas (Paris)CENPQ
WikiGenes55166
SOURCE (Princeton)CENPQ
Genetics Home Reference (NIH)CENPQ
Genomic and cartography
GoldenPath hg38 (UCSC)CENPQ  -     chr6:49463383-49493107 +  6p12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CENPQ  -     6p12.3   [Description]    (hg19-Feb_2009)
EnsemblCENPQ - 6p12.3 [CytoView hg19]  CENPQ - 6p12.3 [CytoView hg38]
Mapping of homologs : NCBICENPQ [Mapview hg19]  CENPQ [Mapview hg38]
OMIM611506   
Gene and transcription
Genbank (Entrez)AA460110 AA811376 AI039464 AK001407 AK293016
RefSeq transcript (Entrez)NM_018132
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CENPQ
Cluster EST : UnigeneHs.88663 [ NCBI ]
CGAP (NCI)Hs.88663
Alternative Splicing GalleryENSG00000031691
Gene ExpressionCENPQ [ NCBI-GEO ]   CENPQ [ EBI - ARRAY_EXPRESS ]   CENPQ [ SEEK ]   CENPQ [ MEM ]
Gene Expression Viewer (FireBrowse)CENPQ [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55166
GTEX Portal (Tissue expression)CENPQ
Human Protein AtlasENSG00000031691-CENPQ [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ7L2Z9   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ7L2Z9  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ7L2Z9
Splice isoforms : SwissVarQ7L2Z9
PhosPhoSitePlusQ7L2Z9
Domains : Interpro (EBI)CAD_CENP-Q   
Domain families : Pfam (Sanger)CENP-Q (PF13094)   
Domain families : Pfam (NCBI)pfam13094   
Conserved Domain (NCBI)CENPQ
DMDM Disease mutations55166
Blocks (Seattle)CENPQ
SuperfamilyQ7L2Z9
Human Protein Atlas [tissue]ENSG00000031691-CENPQ [tissue]
Peptide AtlasQ7L2Z9
HPRD10788
IPIIPI00018689   
Protein Interaction databases
DIP (DOE-UCLA)Q7L2Z9
IntAct (EBI)Q7L2Z9
FunCoupENSG00000031691
BioGRIDCENPQ
STRING (EMBL)CENPQ
ZODIACCENPQ
Ontologies - Pathways
QuickGOQ7L2Z9
Ontology : AmiGOchromosome, centromeric region  nucleoplasm  nucleoplasm  cytosol  sister chromatid cohesion  actin cytoskeleton  CENP-A containing nucleosome assembly  metaphase plate congression  positive regulation of protein localization to kinetochore  
Ontology : EGO-EBIchromosome, centromeric region  nucleoplasm  nucleoplasm  cytosol  sister chromatid cohesion  actin cytoskeleton  CENP-A containing nucleosome assembly  metaphase plate congression  positive regulation of protein localization to kinetochore  
NDEx NetworkCENPQ
Atlas of Cancer Signalling NetworkCENPQ
Wikipedia pathwaysCENPQ
Orthology - Evolution
OrthoDB55166
GeneTree (enSembl)ENSG00000031691
Phylogenetic Trees/Animal Genes : TreeFamCENPQ
HOVERGENQ7L2Z9
HOGENOMQ7L2Z9
Homologs : HomoloGeneCENPQ
Homology/Alignments : Family Browser (UCSC)CENPQ
Gene fusions - Rearrangements
Fusion : QuiverCENPQ
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCENPQ [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CENPQ
dbVarCENPQ
ClinVarCENPQ
1000_GenomesCENPQ 
Exome Variant ServerCENPQ
ExAC (Exome Aggregation Consortium)ENSG00000031691
GNOMAD BrowserENSG00000031691
Varsome BrowserCENPQ
Genetic variants : HAPMAP55166
Genomic Variants (DGV)CENPQ [DGVbeta]
DECIPHERCENPQ [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCENPQ 
Mutations
ICGC Data PortalCENPQ 
TCGA Data PortalCENPQ 
Broad Tumor PortalCENPQ
OASIS PortalCENPQ [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCENPQ  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCENPQ
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CENPQ
DgiDB (Drug Gene Interaction Database)CENPQ
DoCM (Curated mutations)CENPQ (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CENPQ (select a term)
intoGenCENPQ
Cancer3DCENPQ(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM611506   
Orphanet
DisGeNETCENPQ
MedgenCENPQ
Genetic Testing Registry CENPQ
NextProtQ7L2Z9 [Medical]
TSGene55166
GENETestsCENPQ
Target ValidationCENPQ
Huge Navigator CENPQ [HugePedia]
snp3D : Map Gene to Disease55166
BioCentury BCIQCENPQ
ClinGenCENPQ
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55166
Chemical/Pharm GKB GenePA134973276
Clinical trialCENPQ
Miscellaneous
canSAR (ICR)CENPQ (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCENPQ
EVEXCENPQ
GoPubMedCENPQ
iHOPCENPQ
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:40:18 CEST 2018

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