Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CENPX (centromere protein X)

Identity

Alias_namesSTRA13
MHF2
stimulated by retinoic acid 13 homolog (mouse)
stimulated by retinoic acid 13
FANCM associated histone fold protein 2
Alias_symbol (synonym)MGC14480
FAAP10
CENP-X
Other aliasD9
HGNC (Hugo) CENPX
LocusID (NCBI) 201254
Atlas_Id 55930
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 79976579 and ends at 79980785 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CENPX   11422
Cards
Entrez_Gene (NCBI)CENPX  201254  centromere protein X
AliasesCENP-X; D9; FAAP10; MHF2; 
STRA13
GeneCards (Weizmann)CENPX
Ensembl hg19 (Hinxton)ENSG00000169689 [Gene_View]  chr17:79976579-79980785 [Contig_View]  CENPX [Vega]
Ensembl hg38 (Hinxton)ENSG00000169689 [Gene_View]  chr17:79976579-79980785 [Contig_View]  CENPX [Vega]
ICGC DataPortalENSG00000169689
TCGA cBioPortalCENPX
AceView (NCBI)CENPX
Genatlas (Paris)CENPX
WikiGenes201254
SOURCE (Princeton)CENPX
Genetics Home Reference (NIH)CENPX
Genomic and cartography
GoldenPath hg19 (UCSC)CENPX  -     chr17:79976579-79980785 -  17q25.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CENPX  -     17q25.3   [Description]    (hg38-Dec_2013)
EnsemblCENPX - 17q25.3 [CytoView hg19]  CENPX - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBICENPX [Mapview hg19]  CENPX [Mapview hg38]
OMIM615128   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001271006 NM_001271007 NM_001330536 NM_144998
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CENPX
Cluster EST : UnigeneHs.37616 [ NCBI ]
CGAP (NCI)Hs.37616
Alternative Splicing GalleryENSG00000169689
Gene ExpressionCENPX [ NCBI-GEO ]   CENPX [ EBI - ARRAY_EXPRESS ]   CENPX [ SEEK ]   CENPX [ MEM ]
Gene Expression Viewer (FireBrowse)CENPX [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)201254
GTEX Portal (Tissue expression)CENPX
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CENPX
DMDM Disease mutations201254
Blocks (Seattle)CENPX
Human Protein AtlasENSG00000169689
HPRD18121
IPIIPI00795646   IPI00010887   IPI00795077   
Protein Interaction databases
FunCoupENSG00000169689
BioGRIDCENPX
STRING (EMBL)CENPX
ZODIACCENPX
Ontologies - Pathways
Huge Navigator CENPX [HugePedia]
snp3D : Map Gene to Disease201254
BioCentury BCIQCENPX
ClinGenCENPX
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD201254
Chemical/Pharm GKB GenePA36223
Clinical trialCENPX
Miscellaneous
canSAR (ICR)CENPX (select the gene name)
Probes
Litterature
PubMed20 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCENPX
EVEXCENPX
GoPubMedCENPX
iHOPCENPX
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:00:00 CET 2017

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