Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CEP152 (centrosomal protein 152)

Identity

Alias_namescentrosomal protein 152kDa
Alias_symbol (synonym)KIAA0912
SCKL5
MCPH9
Other aliasMCPH4
HGNC (Hugo) CEP152
LocusID (NCBI) 22995
Atlas_Id 54930
Location 15q21.1  [Link to chromosome band 15q21]
Location_base_pair Starts at 48737938 and ends at 48811146 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
PPP1R12A (12q21.2) / CEP152 (15q21.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP152   29298
Cards
Entrez_Gene (NCBI)CEP152  22995  centrosomal protein 152
AliasesMCPH4; MCPH9; SCKL5
GeneCards (Weizmann)CEP152
Ensembl hg19 (Hinxton)ENSG00000103995 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000103995 [Gene_View]  chr15:48737938-48811146 [Contig_View]  CEP152 [Vega]
ICGC DataPortalENSG00000103995
TCGA cBioPortalCEP152
AceView (NCBI)CEP152
Genatlas (Paris)CEP152
WikiGenes22995
SOURCE (Princeton)CEP152
Genetics Home Reference (NIH)CEP152
Genomic and cartography
GoldenPath hg38 (UCSC)CEP152  -     chr15:48737938-48811146 -  15q21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP152  -     15q21.1   [Description]    (hg19-Feb_2009)
EnsemblCEP152 - 15q21.1 [CytoView hg19]  CEP152 - 15q21.1 [CytoView hg38]
Mapping of homologs : NCBICEP152 [Mapview hg19]  CEP152 [Mapview hg38]
OMIM613529   613823   614852   
Gene and transcription
Genbank (Entrez)AB020719 AI038653 AK025247 AK303805 BC029603
RefSeq transcript (Entrez)NM_001194998 NM_014985
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP152
Cluster EST : UnigeneHs.597323 [ NCBI ]
CGAP (NCI)Hs.597323
Alternative Splicing GalleryENSG00000103995
Gene ExpressionCEP152 [ NCBI-GEO ]   CEP152 [ EBI - ARRAY_EXPRESS ]   CEP152 [ SEEK ]   CEP152 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP152 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22995
GTEX Portal (Tissue expression)CEP152
Protein : pattern, domain, 3D structure
UniProt/SwissProtO94986   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO94986  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO94986
Splice isoforms : SwissVarO94986
PhosPhoSitePlusO94986
Domains : Interpro (EBI)Cep152   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CEP152
DMDM Disease mutations22995
Blocks (Seattle)CEP152
PDB (SRS)4N7V   
PDB (PDBSum)4N7V   
PDB (IMB)4N7V   
PDB (RSDB)4N7V   
Structural Biology KnowledgeBase4N7V   
SCOP (Structural Classification of Proteins)4N7V   
CATH (Classification of proteins structures)4N7V   
SuperfamilyO94986
Human Protein AtlasENSG00000103995
Peptide AtlasO94986
HPRD16778
IPIIPI00016653   IPI00477050   IPI00872707   IPI00980540   IPI01010232   
Protein Interaction databases
DIP (DOE-UCLA)O94986
IntAct (EBI)O94986
FunCoupENSG00000103995
BioGRIDCEP152
STRING (EMBL)CEP152
ZODIACCEP152
Ontologies - Pathways
QuickGOO94986
Ontology : AmiGOG2/M transition of mitotic cell cycle  pericentriolar material  protein binding  nucleoplasm  centrosome  centriole  cytosol  centriole replication  centriole replication  protein kinase binding  centrosome duplication  ciliary basal body docking  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  deuterosome  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  pericentriolar material  protein binding  nucleoplasm  centrosome  centriole  cytosol  centriole replication  centriole replication  protein kinase binding  centrosome duplication  ciliary basal body docking  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  deuterosome  
NDEx NetworkCEP152
Atlas of Cancer Signalling NetworkCEP152
Wikipedia pathwaysCEP152
Orthology - Evolution
OrthoDB22995
GeneTree (enSembl)ENSG00000103995
Phylogenetic Trees/Animal Genes : TreeFamCEP152
HOVERGENO94986
HOGENOMO94986
Homologs : HomoloGeneCEP152
Homology/Alignments : Family Browser (UCSC)CEP152
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP152 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP152
dbVarCEP152
ClinVarCEP152
1000_GenomesCEP152 
Exome Variant ServerCEP152
ExAC (Exome Aggregation Consortium)CEP152 (select the gene name)
Genetic variants : HAPMAP22995
Genomic Variants (DGV)CEP152 [DGVbeta]
DECIPHERCEP152 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP152 
Mutations
ICGC Data PortalCEP152 
TCGA Data PortalCEP152 
Broad Tumor PortalCEP152
OASIS PortalCEP152 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP152  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP152
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
LOVD (Leiden Open Variation Database)Mendelian genes
BioMutasearch CEP152
DgiDB (Drug Gene Interaction Database)CEP152
DoCM (Curated mutations)CEP152 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP152 (select a term)
intoGenCEP152
Cancer3DCEP152(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613529    613823    614852   
Orphanet732    954   
MedgenCEP152
Genetic Testing Registry CEP152
NextProtO94986 [Medical]
TSGene22995
GENETestsCEP152
Target ValidationCEP152
Huge Navigator CEP152 [HugePedia]
snp3D : Map Gene to Disease22995
BioCentury BCIQCEP152
ClinGenCEP152
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD22995
Chemical/Pharm GKB GenePA142672126
Clinical trialCEP152
Miscellaneous
canSAR (ICR)CEP152 (select the gene name)
Probes
Litterature
PubMed38 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP152
EVEXCEP152
GoPubMedCEP152
iHOPCEP152
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 12:28:00 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.