Atlas of Genetics and Cytogenetics in Oncology and Haematology

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   
X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CEP164 (centrosomal protein 164)

Identity

Alias (NCBI)NPHP15
HGNC (Hugo) CEP164
HGNC Alias symbKIAA1052
NPHP15
HGNC Previous namecentrosomal protein 164kDa
LocusID (NCBI) 22897
Atlas_Id 50935
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 117327854 and ends at 117413266 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CEP164 (11q23.3)::APOC3 (11q23.3)KMT2A (11q23.3)::CEP164 (11q23.3)MED26 (19p13.11)::CEP164 (11q23.3)
MLLT10 (10p12.31)::CEP164 (11q23.3)CEP164 11q23.3::APOC3 11q23.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

Other Leukemias implicated (Data extracted from papers in the Atlas) [ 3 ]
  t(10;11)(p12;q23) MLLT10::CEP164
t(11;11)(q23;q23) KMT2A::CEP164
t(11;19)(q23;q13) CEP164::EMP3

External links

 

Nomenclature
HGNC (Hugo)CEP164   29182
Cards
Entrez_Gene (NCBI)CEP164    centrosomal protein 164
AliasesNPHP15
GeneCards (Weizmann)CEP164
Ensembl hg19 (Hinxton)ENSG00000110274 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000110274 [Gene_View]  ENSG00000110274 [Sequence]  chr11:117327854-117413266 [Contig_View]  CEP164 [Vega]
ICGC DataPortalENSG00000110274
TCGA cBioPortalCEP164
AceView (NCBI)CEP164
Genatlas (Paris)CEP164
SOURCE (Princeton)CEP164
Genetics Home Reference (NIH)CEP164
Genomic and cartography
GoldenPath hg38 (UCSC)CEP164  -     chr11:117327854-117413266 +  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP164  -     11q23.3   [Description]    (hg19-Feb_2009)
GoldenPathCEP164 - 11q23.3 [CytoView hg19]  CEP164 - 11q23.3 [CytoView hg38]
ImmunoBaseENSG00000110274
Genome Data Viewer NCBICEP164 [Mapview hg19]  
OMIM614845   614848   
Gene and transcription
Genbank (Entrez)AB028975 AK001412 AK125995 AK302991 AK303067
RefSeq transcript (Entrez)NM_001271933 NM_014956
Consensus coding sequences : CCDS (NCBI)CEP164
Gene ExpressionCEP164 [ NCBI-GEO ]   CEP164 [ EBI - ARRAY_EXPRESS ]   CEP164 [ SEEK ]   CEP164 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP164 [ Firebrowse - Broad ]
GenevisibleExpression of CEP164 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)22897
GTEX Portal (Tissue expression)CEP164
Human Protein AtlasENSG00000110274-CEP164 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9UPV0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9UPV0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9UPV0
PhosPhoSitePlusQ9UPV0
Domaine pattern : Prosite (Expaxy)WW_DOMAIN_2 (PS50020)   
Domains : Interpro (EBI)WW_dom    WW_dom_sf   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)WW (SM00456)  
Conserved Domain (NCBI)CEP164
SuperfamilyQ9UPV0
AlphaFold pdb e-kbQ9UPV0   
Human Protein Atlas [tissue]ENSG00000110274-CEP164 [tissue]
HPRD10854
Protein Interaction databases
DIP (DOE-UCLA)Q9UPV0
IntAct (EBI)Q9UPV0
BioGRIDCEP164
STRING (EMBL)CEP164
ZODIACCEP164
Ontologies - Pathways
QuickGOQ9UPV0
Ontology : AmiGOG2/M transition of mitotic cell cycle  protein binding  extracellular space  nucleoplasm  centrosome  centrosome  centriole  centriole  cytosol  DNA repair  regulation of G2/M transition of mitotic cell cycle  cell division  cilium assembly  cilium assembly  ciliary transition fiber  ciliary transition fiber  ciliary basal body-plasma membrane docking  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  protein binding  extracellular space  nucleoplasm  centrosome  centrosome  centriole  centriole  cytosol  DNA repair  regulation of G2/M transition of mitotic cell cycle  cell division  cilium assembly  cilium assembly  ciliary transition fiber  ciliary transition fiber  ciliary basal body-plasma membrane docking  
NDEx NetworkCEP164
Atlas of Cancer Signalling NetworkCEP164
Wikipedia pathwaysCEP164
Orthology - Evolution
OrthoDB22897
GeneTree (enSembl)ENSG00000110274
Phylogenetic Trees/Animal Genes : TreeFamCEP164
Homologs : HomoloGeneCEP164
Homology/Alignments : Family Browser (UCSC)CEP164
Gene fusions - Rearrangements
Fusion : MitelmanCEP164::APOC3 [11q23.3/11q23.3]  
Fusion : MitelmanMLLT10::CEP164 [10p12.31/11q23.3]  
Fusion : QuiverCEP164
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP164 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP164
dbVarCEP164
ClinVarCEP164
MonarchCEP164
1000_GenomesCEP164 
Exome Variant ServerCEP164
GNOMAD BrowserENSG00000110274
Varsome BrowserCEP164
ACMGCEP164 variants
VarityQ9UPV0
Genomic Variants (DGV)CEP164 [DGVbeta]
DECIPHERCEP164 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP164 
Mutations
ICGC Data PortalCEP164 
TCGA Data PortalCEP164 
Broad Tumor PortalCEP164
OASIS PortalCEP164 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP164  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCEP164
Mutations and Diseases : HGMDCEP164
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCEP164
DgiDB (Drug Gene Interaction Database)CEP164
DoCM (Curated mutations)CEP164
CIViC (Clinical Interpretations of Variants in Cancer)CEP164
Cancer3DCEP164
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614845    614848   
Orphanet2824   
DisGeNETCEP164
MedgenCEP164
Genetic Testing Registry CEP164
NextProtQ9UPV0 [Medical]
GENETestsCEP164
Target ValidationCEP164
Huge Navigator CEP164 [HugePedia]
ClinGenCEP164
Clinical trials, drugs, therapy
MyCancerGenomeCEP164
Protein Interactions : CTDCEP164
Pharm GKB GenePA142672127
PharosQ9UPV0
Clinical trialCEP164
Miscellaneous
canSAR (ICR)CEP164
HarmonizomeCEP164
ARCHS4CEP164
DataMed IndexCEP164
Probes
Litterature
PubMed51 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCEP164
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jan 17 15:18:40 CET 2022
Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.