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CEP170P1 (centrosomal protein 170 pseudogene 1)

Identity

Alias (NCBI)CEP170L
FAM68B
KIAA0470L
HGNC (Hugo) CEP170P1
HGNC Alias symbMGC26143
FAM68B
HGNC Previous nameKIAA0470L
 CEP170L
HGNC Previous nameKIAA0470-like
 centrosomal protein 170kDa-like
 centrosomal protein 170kDa pseudogene 1
LocusID (NCBI) 645455
Atlas_Id 61720
Location 4q26  [Link to chromosome band 4q26]
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 2 ]
  t(4;4)(q26;q35) DUX4/CEP170P1
t(4;4)(q26;q35) DUX4/CEP170P1


External links

 

Nomenclature
HGNC (Hugo)CEP170P1   28364
Cards
Entrez_Gene (NCBI)CEP170P1    centrosomal protein 170 pseudogene 1
AliasesCEP170L; FAM68B; KIAA0470L
GeneCards (Weizmann)CEP170P1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  - [Contig_View]  CEP170P1 [Vega]
TCGA cBioPortalCEP170P1
AceView (NCBI)CEP170P1
Genatlas (Paris)CEP170P1
SOURCE (Princeton)CEP170P1
Genetics Home Reference (NIH)CEP170P1
Genomic and cartography
GoldenPath hg38 (UCSC)CEP170P1  -  
GoldenPath hg19 (UCSC)CEP170P1  -  
GoldenPathCEP170P1 - [CytoView hg19]  CEP170P1 - [CytoView hg38]
Genome Data Viewer NCBICEP170P1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC014590
RefSeq transcript (Entrez)NM_153243
Consensus coding sequences : CCDS (NCBI)CEP170P1
Gene ExpressionCEP170P1 [ NCBI-GEO ]   CEP170P1 [ EBI - ARRAY_EXPRESS ]   CEP170P1 [ SEEK ]   CEP170P1 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP170P1 [ Firebrowse - Broad ]
GenevisibleExpression of CEP170P1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)645455
GTEX Portal (Tissue expression)CEP170P1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96L14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96L14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96L14
PhosPhoSitePlusQ96L14
Domains : Interpro (EBI)CEP170    CEP170_C   
Domain families : Pfam (Sanger)CEP170_C (PF15308)   
Domain families : Pfam (NCBI)pfam15308   
Conserved Domain (NCBI)CEP170P1
SuperfamilyQ96L14
AlphaFold pdb e-kbQ96L14   
Protein Interaction databases
DIP (DOE-UCLA)Q96L14
IntAct (EBI)Q96L14
BioGRIDCEP170P1
STRING (EMBL)CEP170P1
ZODIACCEP170P1
Ontologies - Pathways
QuickGOQ96L14
Ontology : AmiGOprotein binding  identical protein binding  
Ontology : EGO-EBIprotein binding  identical protein binding  
NDEx NetworkCEP170P1
Atlas of Cancer Signalling NetworkCEP170P1
Wikipedia pathwaysCEP170P1
Orthology - Evolution
OrthoDB645455
Phylogenetic Trees/Animal Genes : TreeFamCEP170P1
Homologs : HomoloGeneCEP170P1
Homology/Alignments : Family Browser (UCSC)CEP170P1
Gene fusions - Rearrangements
Fusion : QuiverCEP170P1
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP170P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP170P1
dbVarCEP170P1
ClinVarCEP170P1
MonarchCEP170P1
1000_GenomesCEP170P1 
Exome Variant ServerCEP170P1
Varsome BrowserCEP170P1
ACMGCEP170P1 variants
VarityQ96L14
Genomic Variants (DGV)CEP170P1 [DGVbeta]
DECIPHERCEP170P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP170P1 
Mutations
ICGC Data PortalCEP170P1 
TCGA Data PortalCEP170P1 
Broad Tumor PortalCEP170P1
OASIS PortalCEP170P1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCEP170P1
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCEP170P1
DgiDB (Drug Gene Interaction Database)CEP170P1
DoCM (Curated mutations)CEP170P1
CIViC (Clinical Interpretations of Variants in Cancer)CEP170P1
Cancer3DCEP170P1
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCEP170P1
MedgenCEP170P1
Genetic Testing Registry CEP170P1
NextProtQ96L14 [Medical]
GENETestsCEP170P1
Target ValidationCEP170P1
Huge Navigator CEP170P1 [HugePedia]
ClinGenCEP170P1
Clinical trials, drugs, therapy
MyCancerGenomeCEP170P1
Protein Interactions : CTDCEP170P1
Pharm GKB GenePA142672128
PharosQ96L14
Clinical trialCEP170P1
Miscellaneous
canSAR (ICR)CEP170P1
HarmonizomeCEP170P1
DataMed IndexCEP170P1
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCEP170P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:45:46 CEST 2021

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