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CEP170P1 (centrosomal protein 170 pseudogene 1)

Identity

Alias_namesKIAA0470L
CEP170L
KIAA0470-like
centrosomal protein 170kDa-like
centrosomal protein 170kDa pseudogene 1
Alias_symbol (synonym)MGC26143
FAM68B
Other alias
HGNC (Hugo) CEP170P1
LocusID (NCBI) 645455
Atlas_Id 61720
Location 4q26  [Link to chromosome band 4q26]
Location_base_pair Starts at 118516340 and ends at 118554204 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP170P1   28364
Cards
Entrez_Gene (NCBI)CEP170P1  645455  centrosomal protein 170 pseudogene 1
AliasesCEP170L; FAM68B; KIAA0470L
GeneCards (Weizmann)CEP170P1
Ensembl hg19 (Hinxton)ENSG00000154608 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000154608 [Gene_View]  chr4:118516340-118554204 [Contig_View]  CEP170P1 [Vega]
ICGC DataPortalENSG00000154608
TCGA cBioPortalCEP170P1
AceView (NCBI)CEP170P1
Genatlas (Paris)CEP170P1
WikiGenes645455
SOURCE (Princeton)CEP170P1
Genetics Home Reference (NIH)CEP170P1
Genomic and cartography
GoldenPath hg38 (UCSC)CEP170P1  -     chr4:118516340-118554204 +  4q26   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP170P1  -     4q26   [Description]    (hg19-Feb_2009)
EnsemblCEP170P1 - 4q26 [CytoView hg19]  CEP170P1 - 4q26 [CytoView hg38]
Mapping of homologs : NCBICEP170P1 [Mapview hg19]  CEP170P1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC014590
RefSeq transcript (Entrez)NM_153243
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP170P1
Cluster EST : UnigeneHs.408293 [ NCBI ]
CGAP (NCI)Hs.408293
Alternative Splicing GalleryENSG00000154608
Gene ExpressionCEP170P1 [ NCBI-GEO ]   CEP170P1 [ EBI - ARRAY_EXPRESS ]   CEP170P1 [ SEEK ]   CEP170P1 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP170P1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)645455
GTEX Portal (Tissue expression)CEP170P1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96L14   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96L14  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96L14
Splice isoforms : SwissVarQ96L14
PhosPhoSitePlusQ96L14
Domains : Interpro (EBI)CEP170    CEP170_C   
Domain families : Pfam (Sanger)CEP170_C (PF15308)   
Domain families : Pfam (NCBI)pfam15308   
Conserved Domain (NCBI)CEP170P1
DMDM Disease mutations645455
Blocks (Seattle)CEP170P1
SuperfamilyQ96L14
Human Protein AtlasENSG00000154608
Peptide AtlasQ96L14
IPIIPI00550875   
Protein Interaction databases
DIP (DOE-UCLA)Q96L14
IntAct (EBI)Q96L14
FunCoupENSG00000154608
BioGRIDCEP170P1
STRING (EMBL)CEP170P1
ZODIACCEP170P1
Ontologies - Pathways
QuickGOQ96L14
Ontology : AmiGOprotein binding  identical protein binding  
Ontology : EGO-EBIprotein binding  identical protein binding  
NDEx NetworkCEP170P1
Atlas of Cancer Signalling NetworkCEP170P1
Wikipedia pathwaysCEP170P1
Orthology - Evolution
OrthoDB645455
GeneTree (enSembl)ENSG00000154608
Phylogenetic Trees/Animal Genes : TreeFamCEP170P1
HOVERGENQ96L14
HOGENOMQ96L14
Homologs : HomoloGeneCEP170P1
Homology/Alignments : Family Browser (UCSC)CEP170P1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP170P1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP170P1
dbVarCEP170P1
ClinVarCEP170P1
1000_GenomesCEP170P1 
Exome Variant ServerCEP170P1
ExAC (Exome Aggregation Consortium)CEP170P1 (select the gene name)
Genetic variants : HAPMAP645455
Genomic Variants (DGV)CEP170P1 [DGVbeta]
DECIPHERCEP170P1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP170P1 
Mutations
ICGC Data PortalCEP170P1 
TCGA Data PortalCEP170P1 
Broad Tumor PortalCEP170P1
OASIS PortalCEP170P1 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCEP170P1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP170P1
DgiDB (Drug Gene Interaction Database)CEP170P1
DoCM (Curated mutations)CEP170P1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP170P1 (select a term)
intoGenCEP170P1
Cancer3DCEP170P1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCEP170P1
Genetic Testing Registry CEP170P1
NextProtQ96L14 [Medical]
TSGene645455
GENETestsCEP170P1
Target ValidationCEP170P1
Huge Navigator CEP170P1 [HugePedia]
snp3D : Map Gene to Disease645455
BioCentury BCIQCEP170P1
ClinGenCEP170P1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645455
Chemical/Pharm GKB GenePA142672128
Clinical trialCEP170P1
Miscellaneous
canSAR (ICR)CEP170P1 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP170P1
EVEXCEP170P1
GoPubMedCEP170P1
iHOPCEP170P1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:43:16 CEST 2017

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