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CEP19 (centrosomal protein 19kDa)

Identity

Alias_namesC3orf34
chromosome 3 open reading frame 34
centrosomal protein 19kDa
Alias_symbol (synonym)MGC14126
Other aliasMOSPGF
HGNC (Hugo) CEP19
LocusID (NCBI) 84984
Atlas_Id 61721
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 196433148 and ends at 196439165 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP19   28209
Cards
Entrez_Gene (NCBI)CEP19  84984  centrosomal protein 19kDa
AliasesC3orf34; MOSPGF
GeneCards (Weizmann)CEP19
Ensembl hg19 (Hinxton)ENSG00000174007 [Gene_View]  chr3:196433148-196439165 [Contig_View]  CEP19 [Vega]
Ensembl hg38 (Hinxton)ENSG00000174007 [Gene_View]  chr3:196433148-196439165 [Contig_View]  CEP19 [Vega]
ICGC DataPortalENSG00000174007
TCGA cBioPortalCEP19
AceView (NCBI)CEP19
Genatlas (Paris)CEP19
WikiGenes84984
SOURCE (Princeton)CEP19
Genetics Home Reference (NIH)CEP19
Genomic and cartography
GoldenPath hg19 (UCSC)CEP19  -     chr3:196433148-196439165 -  3q29   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CEP19  -     3q29   [Description]    (hg38-Dec_2013)
EnsemblCEP19 - 3q29 [CytoView hg19]  CEP19 - 3q29 [CytoView hg38]
Mapping of homologs : NCBICEP19 [Mapview hg19]  CEP19 [Mapview hg38]
OMIM615586   615703   
Gene and transcription
Genbank (Entrez)AK058155 AK314070 AY099509 BC007827 BX104011
RefSeq transcript (Entrez)NM_032898
RefSeq genomic (Entrez)NC_000003 NC_018914 NG_034109 NT_005612 NW_004929312
Consensus coding sequences : CCDS (NCBI)CEP19
Cluster EST : UnigeneHs.282800 [ NCBI ]
CGAP (NCI)Hs.282800
Alternative Splicing GalleryENSG00000174007
Gene ExpressionCEP19 [ NCBI-GEO ]   CEP19 [ EBI - ARRAY_EXPRESS ]   CEP19 [ SEEK ]   CEP19 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP19 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84984
GTEX Portal (Tissue expression)CEP19
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96LK0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96LK0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96LK0
Splice isoforms : SwissVarQ96LK0
PhosPhoSitePlusQ96LK0
Domains : Interpro (EBI)CEP19   
Domain families : Pfam (Sanger)CEP19 (PF14933)   
Domain families : Pfam (NCBI)pfam14933   
Conserved Domain (NCBI)CEP19
DMDM Disease mutations84984
Blocks (Seattle)CEP19
SuperfamilyQ96LK0
Human Protein AtlasENSG00000174007
Peptide AtlasQ96LK0
HPRD17488
IPIIPI00787912   IPI00917249   
Protein Interaction databases
DIP (DOE-UCLA)Q96LK0
IntAct (EBI)Q96LK0
FunCoupENSG00000174007
BioGRIDCEP19
STRING (EMBL)CEP19
ZODIACCEP19
Ontologies - Pathways
QuickGOQ96LK0
Ontology : AmiGOspindle pole  protein binding  centriole  ciliary basal body  
Ontology : EGO-EBIspindle pole  protein binding  centriole  ciliary basal body  
NDEx NetworkCEP19
Atlas of Cancer Signalling NetworkCEP19
Wikipedia pathwaysCEP19
Orthology - Evolution
OrthoDB84984
GeneTree (enSembl)ENSG00000174007
Phylogenetic Trees/Animal Genes : TreeFamCEP19
HOVERGENQ96LK0
HOGENOMQ96LK0
Homologs : HomoloGeneCEP19
Homology/Alignments : Family Browser (UCSC)CEP19
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP19 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP19
dbVarCEP19
ClinVarCEP19
1000_GenomesCEP19 
Exome Variant ServerCEP19
ExAC (Exome Aggregation Consortium)CEP19 (select the gene name)
Genetic variants : HAPMAP84984
Genomic Variants (DGV)CEP19 [DGVbeta]
DECIPHER (Syndromes)3:196433148-196439165  ENSG00000174007
CONAN: Copy Number AnalysisCEP19 
Mutations
ICGC Data PortalCEP19 
TCGA Data PortalCEP19 
Broad Tumor PortalCEP19
OASIS PortalCEP19 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP19  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP19
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP19
DgiDB (Drug Gene Interaction Database)CEP19
DoCM (Curated mutations)CEP19 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP19 (select a term)
intoGenCEP19
Cancer3DCEP19(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615586    615703   
Orphanet22688   
MedgenCEP19
Genetic Testing Registry CEP19
NextProtQ96LK0 [Medical]
TSGene84984
GENETestsCEP19
Huge Navigator CEP19 [HugePedia]
snp3D : Map Gene to Disease84984
BioCentury BCIQCEP19
ClinGenCEP19
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84984
Chemical/Pharm GKB GenePA142672395
Clinical trialCEP19
Miscellaneous
canSAR (ICR)CEP19 (select the gene name)
Probes
Litterature
PubMed9 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP19
EVEXCEP19
GoPubMedCEP19
iHOPCEP19
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:09 CET 2017

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