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CEP44 (centrosomal protein 44kDa)

Identity

Alias_namesKIAA1712
KIAA1712
centrosomal protein 44kDa
Other aliasPS1TP3
HGNC (Hugo) CEP44
LocusID (NCBI) 80817
Atlas_Id 61725
Location 4q34.1  [Link to chromosome band 4q34]
Location_base_pair Starts at 175204828 and ends at 175241482 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CEP44 (4q34.1) / PRLR (5p13.2)INTS6 (13q14.3) / CEP44 (4q34.1)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP44   29356
Cards
Entrez_Gene (NCBI)CEP44  80817  centrosomal protein 44kDa
AliasesKIAA1712; PS1TP3
GeneCards (Weizmann)CEP44
Ensembl hg19 (Hinxton)ENSG00000164118 [Gene_View]  chr4:175204828-175241482 [Contig_View]  CEP44 [Vega]
Ensembl hg38 (Hinxton)ENSG00000164118 [Gene_View]  chr4:175204828-175241482 [Contig_View]  CEP44 [Vega]
ICGC DataPortalENSG00000164118
TCGA cBioPortalCEP44
AceView (NCBI)CEP44
Genatlas (Paris)CEP44
WikiGenes80817
SOURCE (Princeton)CEP44
Genetics Home Reference (NIH)CEP44
Genomic and cartography
GoldenPath hg19 (UCSC)CEP44  -     chr4:175204828-175241482 +  4q34.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CEP44  -     4q34.1   [Description]    (hg38-Dec_2013)
EnsemblCEP44 - 4q34.1 [CytoView hg19]  CEP44 - 4q34.1 [CytoView hg38]
Mapping of homologs : NCBICEP44 [Mapview hg19]  CEP44 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB051499 AK094961 AK292484 AL699124 AY426674
RefSeq transcript (Entrez)NM_001040157 NM_001145314 NM_030633
RefSeq genomic (Entrez)NC_000004 NC_018915 NT_016354 NW_004929320
Consensus coding sequences : CCDS (NCBI)CEP44
Cluster EST : UnigeneHs.555989 [ NCBI ]
CGAP (NCI)Hs.555989
Alternative Splicing GalleryENSG00000164118
Gene ExpressionCEP44 [ NCBI-GEO ]   CEP44 [ EBI - ARRAY_EXPRESS ]   CEP44 [ SEEK ]   CEP44 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP44 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80817
GTEX Portal (Tissue expression)CEP44
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9C0F1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9C0F1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9C0F1
Splice isoforms : SwissVarQ9C0F1
PhosPhoSitePlusQ9C0F1
Domains : Interpro (EBI)CEP44   
Domain families : Pfam (Sanger)CEP44 (PF15007)   
Domain families : Pfam (NCBI)pfam15007   
Conserved Domain (NCBI)CEP44
DMDM Disease mutations80817
Blocks (Seattle)CEP44
SuperfamilyQ9C0F1
Human Protein AtlasENSG00000164118
Peptide AtlasQ9C0F1
HPRD13885
IPIIPI00304655   IPI00877156   IPI00967374   IPI00966737   IPI00964575   
Protein Interaction databases
DIP (DOE-UCLA)Q9C0F1
IntAct (EBI)Q9C0F1
FunCoupENSG00000164118
BioGRIDCEP44
STRING (EMBL)CEP44
ZODIACCEP44
Ontologies - Pathways
QuickGOQ9C0F1
Ontology : AmiGOspindle pole  protein binding  cytoplasm  centrosome  midbody  
Ontology : EGO-EBIspindle pole  protein binding  cytoplasm  centrosome  midbody  
NDEx NetworkCEP44
Atlas of Cancer Signalling NetworkCEP44
Wikipedia pathwaysCEP44
Orthology - Evolution
OrthoDB80817
GeneTree (enSembl)ENSG00000164118
Phylogenetic Trees/Animal Genes : TreeFamCEP44
HOVERGENQ9C0F1
HOGENOMQ9C0F1
Homologs : HomoloGeneCEP44
Homology/Alignments : Family Browser (UCSC)CEP44
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP44 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP44
dbVarCEP44
ClinVarCEP44
1000_GenomesCEP44 
Exome Variant ServerCEP44
ExAC (Exome Aggregation Consortium)CEP44 (select the gene name)
Genetic variants : HAPMAP80817
Genomic Variants (DGV)CEP44 [DGVbeta]
DECIPHER (Syndromes)4:175204828-175241482  ENSG00000164118
CONAN: Copy Number AnalysisCEP44 
Mutations
ICGC Data PortalCEP44 
TCGA Data PortalCEP44 
Broad Tumor PortalCEP44
OASIS PortalCEP44 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP44  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP44
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP44
DgiDB (Drug Gene Interaction Database)CEP44
DoCM (Curated mutations)CEP44 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP44 (select a term)
intoGenCEP44
Cancer3DCEP44(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCEP44
Genetic Testing Registry CEP44
NextProtQ9C0F1 [Medical]
TSGene80817
GENETestsCEP44
Huge Navigator CEP44 [HugePedia]
snp3D : Map Gene to Disease80817
BioCentury BCIQCEP44
ClinGenCEP44
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80817
Chemical/Pharm GKB GenePA134933992
Clinical trialCEP44
Miscellaneous
canSAR (ICR)CEP44 (select the gene name)
Probes
Litterature
PubMed12 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP44
EVEXCEP44
GoPubMedCEP44
iHOPCEP44
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:10 CET 2017

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