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CEP63 (centrosomal protein 63)

Identity

Alias_namescentrosomal protein 63kDa
Alias_symbol (synonym)FLJ13386
Other aliasSCKL6
HGNC (Hugo) CEP63
LocusID (NCBI) 80254
Atlas_Id 46318
Location 3q22.2  [Link to chromosome band 3q22]
Location_base_pair Starts at 134485733 and ends at 134565028 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CEP63 (3q22.2) / GOLGB1 (3q13.33)USP2 (11q23.3) / CEP63 (3q22.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP63   25815
Cards
Entrez_Gene (NCBI)CEP63  80254  centrosomal protein 63
AliasesSCKL6
GeneCards (Weizmann)CEP63
Ensembl hg19 (Hinxton)ENSG00000182923 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182923 [Gene_View]  chr3:134485733-134565028 [Contig_View]  CEX63[Vega]
ICGC DataPortalENSG00000182923
TCGA cBioPortalCEP63
AceView (NCBI)CEP63
Genatlas (Paris)CEP63
WikiGenes80254
SOURCE (Princeton)CEP63
Genetics Home Reference (NIH)CEP63
Genomic and cartography
GoldenPath hg38 (UCSC)CEP63  -     chr3:134485733-134565028 +  3q22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP63  -     3q22.2   [Description]    (hg19-Feb_2009)
EnsemblCEP63 - 3q22.2 [CytoView hg19]  CEP63 - 3q22.2 [CytoView hg38]
Mapping of homologs : NCBICEP63 [Mapview hg19]  CEP63 [Mapview hg38]
OMIM614724   614728   
Gene and transcription
Genbank (Entrez)AA746981 AF113697 AK023448 AK023738 AK054897
RefSeq transcript (Entrez)NM_001042383 NM_001042384 NM_001042400 NM_025180
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP63
Cluster EST : UnigeneHs.443301 [ NCBI ]
CGAP (NCI)Hs.443301
Alternative Splicing GalleryENSG00000182923
Gene ExpressionCEP63 [ NCBI-GEO ]   CEP63 [ EBI - ARRAY_EXPRESS ]   CEP63 [ SEEK ]   CEP63 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP63 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80254
GTEX Portal (Tissue expression)CEP63
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96MT8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96MT8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96MT8
Splice isoforms : SwissVarQ96MT8
PhosPhoSitePlusQ96MT8
Domains : Interpro (EBI)Cep63/Deup1_N   
Domain families : Pfam (Sanger)CEP63 (PF17045)   
Domain families : Pfam (NCBI)pfam17045   
Conserved Domain (NCBI)CEP63
DMDM Disease mutations80254
Blocks (Seattle)CEP63
SuperfamilyQ96MT8
Human Protein AtlasENSG00000182923
Peptide AtlasQ96MT8
HPRD07826
IPIIPI00043373   IPI00018708   IPI00060568   IPI00041779   IPI00790029   IPI00966454   IPI00967932   IPI00967683   IPI00966747   
Protein Interaction databases
DIP (DOE-UCLA)Q96MT8
IntAct (EBI)Q96MT8
FunCoupENSG00000182923
BioGRIDCEP63
STRING (EMBL)CEP63
ZODIACCEP63
Ontologies - Pathways
QuickGOQ96MT8
Ontology : AmiGODNA damage checkpoint  G2/M transition of mitotic cell cycle  spindle pole  protein binding  centrosome  centriole  centriole  cytosol  centriole replication  centriole replication  signal transduction in response to DNA damage  spindle assembly  cell division  ciliary basal body docking  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  
Ontology : EGO-EBIDNA damage checkpoint  G2/M transition of mitotic cell cycle  spindle pole  protein binding  centrosome  centriole  centriole  cytosol  centriole replication  centriole replication  signal transduction in response to DNA damage  spindle assembly  cell division  ciliary basal body docking  de novo centriole assembly involved in multi-ciliated epithelial cell differentiation  
NDEx NetworkCEP63
Atlas of Cancer Signalling NetworkCEP63
Wikipedia pathwaysCEP63
Orthology - Evolution
OrthoDB80254
GeneTree (enSembl)ENSG00000182923
Phylogenetic Trees/Animal Genes : TreeFamCEP63
HOVERGENQ96MT8
HOGENOMQ96MT8
Homologs : HomoloGeneCEP63
Homology/Alignments : Family Browser (UCSC)CEP63
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP63 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP63
dbVarCEP63
ClinVarCEP63
1000_GenomesCEP63 
Exome Variant ServerCEP63
ExAC (Exome Aggregation Consortium)CEP63 (select the gene name)
Genetic variants : HAPMAP80254
Genomic Variants (DGV)CEP63 [DGVbeta]
DECIPHERCEP63 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP63 
Mutations
ICGC Data PortalCEP63 
TCGA Data PortalCEP63 
Broad Tumor PortalCEP63
OASIS PortalCEP63 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP63  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP63
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP63
DgiDB (Drug Gene Interaction Database)CEP63
DoCM (Curated mutations)CEP63 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP63 (select a term)
intoGenCEP63
Cancer3DCEP63(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614724    614728   
Orphanet732   
MedgenCEP63
Genetic Testing Registry CEP63
NextProtQ96MT8 [Medical]
TSGene80254
GENETestsCEP63
Target ValidationCEP63
Huge Navigator CEP63 [HugePedia]
snp3D : Map Gene to Disease80254
BioCentury BCIQCEP63
ClinGenCEP63
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80254
Chemical/Pharm GKB GenePA142672124
Clinical trialCEP63
Miscellaneous
canSAR (ICR)CEP63 (select the gene name)
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP63
EVEXCEP63
GoPubMedCEP63
iHOPCEP63
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 25 19:02:01 CEST 2017

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