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CEP70 (centrosomal protein 70)

Identity

Other aliasBITE
HGNC (Hugo) CEP70
LocusID (NCBI) 80321
Atlas_Id 56716
Location 3q22.3  [Link to chromosome band 3q22]
Location_base_pair Starts at 138213181 and ends at 138313225 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
CEP70 (3q22.3) / CEP70 (3q22.3)CEP70 (3q22.3) / PIK3CB (3q22.3)CEP70 (3q22.3) / STAG1 (3q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP70   29972
Cards
Entrez_Gene (NCBI)CEP70  80321  centrosomal protein 70
AliasesBITE
GeneCards (Weizmann)CEP70
Ensembl hg19 (Hinxton) [Gene_View]  chr3:138213181-138313225 [Contig_View]  CEP70 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr3:138213181-138313225 [Contig_View]  CEP70 [Vega]
TCGA cBioPortalCEP70
AceView (NCBI)CEP70
Genatlas (Paris)CEP70
WikiGenes80321
SOURCE (Princeton)CEP70
Genetics Home Reference (NIH)CEP70
Genomic and cartography
GoldenPath hg19 (UCSC)CEP70  -     chr3:138213181-138313225 -  3q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CEP70  -     3q22.3   [Description]    (hg38-Dec_2013)
EnsemblCEP70 - 3q22.3 [CytoView hg19]  CEP70 - 3q22.3 [CytoView hg38]
Mapping of homologs : NCBICEP70 [Mapview hg19]  CEP70 [Mapview hg38]
OMIM614310   
Gene and transcription
Genbank (Entrez)AF202146 AF289495 AK023098 AK225440 AK294587
RefSeq transcript (Entrez)NM_001288964 NM_001288965 NM_001288966 NM_001288967 NM_001320598 NM_001320599 NM_001320600 NM_024491
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP70
Cluster EST : UnigeneHs.531962 [ NCBI ]
CGAP (NCI)Hs.531962
Gene ExpressionCEP70 [ NCBI-GEO ]   CEP70 [ EBI - ARRAY_EXPRESS ]   CEP70 [ SEEK ]   CEP70 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP70 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80321
GTEX Portal (Tissue expression)CEP70
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8NHQ1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8NHQ1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8NHQ1
Splice isoforms : SwissVarQ8NHQ1
PhosPhoSitePlusQ8NHQ1
Domaine pattern : Prosite (Expaxy)TPR (PS50005)    TPR_REGION (PS50293)   
Domains : Interpro (EBI)TPR-contain_dom    TPR_repeat   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CEP70
DMDM Disease mutations80321
Blocks (Seattle)CEP70
SuperfamilyQ8NHQ1
Peptide AtlasQ8NHQ1
IPIIPI00304022   IPI00549676   IPI00549791   IPI00946223   IPI00979689   IPI00945933   IPI00945146   IPI00792237   IPI00983076   IPI00795290   
Protein Interaction databases
DIP (DOE-UCLA)Q8NHQ1
IntAct (EBI)Q8NHQ1
BioGRIDCEP70
STRING (EMBL)CEP70
ZODIACCEP70
Ontologies - Pathways
QuickGOQ8NHQ1
Ontology : AmiGOG2/M transition of mitotic cell cycle  protein binding  nucleoplasm  cytoplasm  centrosome  cytosol  nuclear membrane  identical protein binding  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  protein binding  nucleoplasm  cytoplasm  centrosome  cytosol  nuclear membrane  identical protein binding  
NDEx NetworkCEP70
Atlas of Cancer Signalling NetworkCEP70
Wikipedia pathwaysCEP70
Orthology - Evolution
OrthoDB80321
Phylogenetic Trees/Animal Genes : TreeFamCEP70
HOVERGENQ8NHQ1
HOGENOMQ8NHQ1
Homologs : HomoloGeneCEP70
Homology/Alignments : Family Browser (UCSC)CEP70
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP70 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP70
dbVarCEP70
ClinVarCEP70
1000_GenomesCEP70 
Exome Variant ServerCEP70
ExAC (Exome Aggregation Consortium)CEP70 (select the gene name)
Genetic variants : HAPMAP80321
Genomic Variants (DGV)CEP70 [DGVbeta]
DECIPHER (Syndromes)3:138213181-138313225  
CONAN: Copy Number AnalysisCEP70 
Mutations
ICGC Data PortalCEP70 
TCGA Data PortalCEP70 
Broad Tumor PortalCEP70
OASIS PortalCEP70 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP70  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP70
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP70
DgiDB (Drug Gene Interaction Database)CEP70
DoCM (Curated mutations)CEP70 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP70 (select a term)
intoGenCEP70
Cancer3DCEP70(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM614310   
Orphanet
MedgenCEP70
Genetic Testing Registry CEP70
NextProtQ8NHQ1 [Medical]
TSGene80321
GENETestsCEP70
Huge Navigator CEP70 [HugePedia]
snp3D : Map Gene to Disease80321
BioCentury BCIQCEP70
ClinGenCEP70
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD80321
Chemical/Pharm GKB GenePA128394729
Clinical trialCEP70
Miscellaneous
canSAR (ICR)CEP70 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP70
EVEXCEP70
GoPubMedCEP70
iHOPCEP70
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 13:00:03 CET 2017

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