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CEP72 (centrosomal protein 72kDa)

Identity

Alias_namescentrosomal protein 72kDa
Alias_symbol (synonym)KIAA1519
FLJ10565
Other alias-
HGNC (Hugo) CEP72
LocusID (NCBI) 55722
Atlas_Id 61729
Location 5p15.33  [Link to chromosome band 5p15]
Location_base_pair Starts at 612405 and ends at 653666 bp from pter ( according to hg19-Feb_2009)
Fusion genes
(updated 2016)
BRD9 (5p15.33) / CEP72 (5p15.33)CEP72 (5p15.33) / EXOC3 (5p15.33)CEP72 (5p15.33) / FNTA (8p11.21)
CEP72 (5p15.33) / TPPP (5p15.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP72   25547
Cards
Entrez_Gene (NCBI)CEP72  55722  centrosomal protein 72kDa
Aliases
GeneCards (Weizmann)CEP72
Ensembl hg19 (Hinxton)ENSG00000112877 [Gene_View]  chr5:612405-653666 [Contig_View]  CEP72 [Vega]
Ensembl hg38 (Hinxton)ENSG00000112877 [Gene_View]  chr5:612405-653666 [Contig_View]  CEP72 [Vega]
ICGC DataPortalENSG00000112877
TCGA cBioPortalCEP72
AceView (NCBI)CEP72
Genatlas (Paris)CEP72
WikiGenes55722
SOURCE (Princeton)CEP72
Genetics Home Reference (NIH)CEP72
Genomic and cartography
GoldenPath hg19 (UCSC)CEP72  -     chr5:612405-653666 +  5p15.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CEP72  -     5p15.33   [Description]    (hg38-Dec_2013)
EnsemblCEP72 - 5p15.33 [CytoView hg19]  CEP72 - 5p15.33 [CytoView hg38]
Mapping of homologs : NCBICEP72 [Mapview hg19]  CEP72 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB040952 AK001427 AK299072 BC000132 BC001750
RefSeq transcript (Entrez)NM_018140
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NT_187550 NW_004929321
Consensus coding sequences : CCDS (NCBI)CEP72
Cluster EST : UnigeneHs.591741 [ NCBI ]
CGAP (NCI)Hs.591741
Alternative Splicing GalleryENSG00000112877
Gene ExpressionCEP72 [ NCBI-GEO ]   CEP72 [ EBI - ARRAY_EXPRESS ]   CEP72 [ SEEK ]   CEP72 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP72 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55722
GTEX Portal (Tissue expression)CEP72
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P209   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P209  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P209
Splice isoforms : SwissVarQ9P209
PhosPhoSitePlusQ9P209
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)Leu-rich_rpt    Leu-rich_rpt_4    U2A'_phosphoprotein32A_C   
Domain families : Pfam (Sanger)LRR_4 (PF12799)   
Domain families : Pfam (NCBI)pfam12799   
Domain families : Smart (EMBL)LRRcap (SM00446)  
Conserved Domain (NCBI)CEP72
DMDM Disease mutations55722
Blocks (Seattle)CEP72
SuperfamilyQ9P209
Human Protein AtlasENSG00000112877
Peptide AtlasQ9P209
HPRD07685
IPIIPI00465040   IPI00910558   
Protein Interaction databases
DIP (DOE-UCLA)Q9P209
IntAct (EBI)Q9P209
FunCoupENSG00000112877
BioGRIDCEP72
STRING (EMBL)CEP72
ZODIACCEP72
Ontologies - Pathways
QuickGOQ9P209
Ontology : AmiGOG2/M transition of mitotic cell cycle  mitotic cell cycle  protein binding  centrosome  cytosol  organelle organization  spindle organization  gamma-tubulin complex localization  identical protein binding  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  mitotic cell cycle  protein binding  centrosome  cytosol  organelle organization  spindle organization  gamma-tubulin complex localization  identical protein binding  
NDEx NetworkCEP72
Atlas of Cancer Signalling NetworkCEP72
Wikipedia pathwaysCEP72
Orthology - Evolution
OrthoDB55722
GeneTree (enSembl)ENSG00000112877
Phylogenetic Trees/Animal Genes : TreeFamCEP72
HOVERGENQ9P209
HOGENOMQ9P209
Homologs : HomoloGeneCEP72
Homology/Alignments : Family Browser (UCSC)CEP72
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP72 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP72
dbVarCEP72
ClinVarCEP72
1000_GenomesCEP72 
Exome Variant ServerCEP72
ExAC (Exome Aggregation Consortium)CEP72 (select the gene name)
Genetic variants : HAPMAP55722
Genomic Variants (DGV)CEP72 [DGVbeta]
DECIPHER (Syndromes)5:612405-653666  ENSG00000112877
CONAN: Copy Number AnalysisCEP72 
Mutations
ICGC Data PortalCEP72 
TCGA Data PortalCEP72 
Broad Tumor PortalCEP72
OASIS PortalCEP72 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP72  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP72
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP72
DgiDB (Drug Gene Interaction Database)CEP72
DoCM (Curated mutations)CEP72 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP72 (select a term)
intoGenCEP72
Cancer3DCEP72(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCEP72
Genetic Testing Registry CEP72
NextProtQ9P209 [Medical]
TSGene55722
GENETestsCEP72
Huge Navigator CEP72 [HugePedia]
snp3D : Map Gene to Disease55722
BioCentury BCIQCEP72
ClinGenCEP72
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55722
Chemical/Pharm GKB GenePA142672125
Clinical trialCEP72
Miscellaneous
canSAR (ICR)CEP72 (select the gene name)
Probes
Litterature
PubMed26 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP72
EVEXCEP72
GoPubMedCEP72
iHOPCEP72
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:10 CET 2017

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