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CEP72 (centrosomal protein 72)

Identity

Other alias-
HGNC (Hugo) CEP72
LocusID (NCBI) 55722
Atlas_Id 57154
Location 5p15.33  [Link to chromosome band 5p15]
Location_base_pair Starts at 612352 and ends at 653549 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
BRD9 (5p15.33) / CEP72 (5p15.33)CEP72 (5p15.33) / EXOC3 (5p15.33)CEP72 (5p15.33) / FNTA (8p11.21)
CEP72 (5p15.33) / TPPP (5p15.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP72   25547
Cards
Entrez_Gene (NCBI)CEP72  55722  centrosomal protein 72
Aliases
GeneCards (Weizmann)CEP72
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:612352-653549 [Contig_View]  CEP72 [Vega]
TCGA cBioPortalCEP72
AceView (NCBI)CEP72
Genatlas (Paris)CEP72
WikiGenes55722
SOURCE (Princeton)CEP72
Genetics Home Reference (NIH)CEP72
Genomic and cartography
GoldenPath hg38 (UCSC)CEP72  -     chr5:612352-653549 +  5p15.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP72  -     5p15.33   [Description]    (hg19-Feb_2009)
EnsemblCEP72 - 5p15.33 [CytoView hg19]  CEP72 - 5p15.33 [CytoView hg38]
Mapping of homologs : NCBICEP72 [Mapview hg19]  CEP72 [Mapview hg38]
OMIM616475   
Gene and transcription
Genbank (Entrez)AB040952 AK001427 AK299072 BC000132 BC001750
RefSeq transcript (Entrez)NM_018140
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_187550
Consensus coding sequences : CCDS (NCBI)CEP72
Cluster EST : UnigeneHs.591741 [ NCBI ]
CGAP (NCI)Hs.591741
Gene ExpressionCEP72 [ NCBI-GEO ]   CEP72 [ EBI - ARRAY_EXPRESS ]   CEP72 [ SEEK ]   CEP72 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP72 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)55722
GTEX Portal (Tissue expression)CEP72
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9P209   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9P209  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9P209
Splice isoforms : SwissVarQ9P209
PhosPhoSitePlusQ9P209
Domaine pattern : Prosite (Expaxy)LRR (PS51450)   
Domains : Interpro (EBI)L_dom-like    Leu-rich_rpt    Leu-rich_rpt_typical-subtyp    U2A'_phosphoprotein32A_C   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Domain families : Smart (EMBL)LRR_TYP (SM00369)  LRRcap (SM00446)  
Conserved Domain (NCBI)CEP72
DMDM Disease mutations55722
Blocks (Seattle)CEP72
SuperfamilyQ9P209
Peptide AtlasQ9P209
IPIIPI00465040   IPI00910558   
Protein Interaction databases
DIP (DOE-UCLA)Q9P209
IntAct (EBI)Q9P209
BioGRIDCEP72
STRING (EMBL)CEP72
ZODIACCEP72
Ontologies - Pathways
QuickGOQ9P209
Ontology : AmiGOG2/M transition of mitotic cell cycle  protein binding  centrosome  cytosol  spindle organization  centriole replication  regulation of G2/M transition of mitotic cell cycle  gamma-tubulin complex localization  centriolar satellite  identical protein binding  ciliary basal body-plasma membrane docking  regulation of protein localization to centrosome  
Ontology : EGO-EBIG2/M transition of mitotic cell cycle  protein binding  centrosome  cytosol  spindle organization  centriole replication  regulation of G2/M transition of mitotic cell cycle  gamma-tubulin complex localization  centriolar satellite  identical protein binding  ciliary basal body-plasma membrane docking  regulation of protein localization to centrosome  
NDEx NetworkCEP72
Atlas of Cancer Signalling NetworkCEP72
Wikipedia pathwaysCEP72
Orthology - Evolution
OrthoDB55722
Phylogenetic Trees/Animal Genes : TreeFamCEP72
HOVERGENQ9P209
HOGENOMQ9P209
Homologs : HomoloGeneCEP72
Homology/Alignments : Family Browser (UCSC)CEP72
Gene fusions - Rearrangements
Tumor Fusion PortalCEP72
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP72 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP72
dbVarCEP72
ClinVarCEP72
1000_GenomesCEP72 
Exome Variant ServerCEP72
ExAC (Exome Aggregation Consortium)
Genetic variants : HAPMAP55722
Genomic Variants (DGV)CEP72 [DGVbeta]
DECIPHERCEP72 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP72 
Mutations
ICGC Data PortalCEP72 
TCGA Data PortalCEP72 
Broad Tumor PortalCEP72
OASIS PortalCEP72 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP72  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP72
BioMutasearch CEP72
DgiDB (Drug Gene Interaction Database)CEP72
DoCM (Curated mutations)CEP72 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP72 (select a term)
intoGenCEP72
Cancer3DCEP72(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616475   
Orphanet
DisGeNETCEP72
MedgenCEP72
Genetic Testing Registry CEP72
NextProtQ9P209 [Medical]
TSGene55722
GENETestsCEP72
Target ValidationCEP72
Huge Navigator CEP72 [HugePedia]
snp3D : Map Gene to Disease55722
BioCentury BCIQCEP72
ClinGenCEP72
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD55722
Chemical/Pharm GKB GenePA142672125
Clinical trialCEP72
Miscellaneous
canSAR (ICR)CEP72 (select the gene name)
Probes
Litterature
PubMed39 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP72
EVEXCEP72
GoPubMedCEP72
iHOPCEP72
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 14:07:23 CET 2017

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