Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CEP83-AS1 (CEP83 antisense RNA 1 (head to head))

Identity

Alias_namesCCDC41-AS1
CCDC41 antisense RNA 1 (head to head)
Other alias
HGNC (Hugo) CEP83-AS1
LocusID (NCBI) 144486
Atlas_Id 61732
Location 12q22  [Link to chromosome band 12q22]
Location_base_pair Starts at 94460003 and ends at 94462568 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP83-AS1   27055
Cards
Entrez_Gene (NCBI)CEP83-AS1  144486  CEP83 antisense RNA 1 (head to head)
AliasesCCDC41-AS1
GeneCards (Weizmann)CEP83-AS1
Ensembl hg19 (Hinxton)ENSG00000278916 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278916 [Gene_View]  chr12:94460003-94462568 [Contig_View]  CEP83-AS1 [Vega]
ICGC DataPortalENSG00000278916
TCGA cBioPortalCEP83-AS1
AceView (NCBI)CEP83-AS1
Genatlas (Paris)CEP83-AS1
WikiGenes144486
SOURCE (Princeton)CEP83-AS1
Genetics Home Reference (NIH)CEP83-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CEP83-AS1  -     chr12:94460003-94462568 +  12q22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP83-AS1  -     12q22   [Description]    (hg19-Feb_2009)
EnsemblCEP83-AS1 - 12q22 [CytoView hg19]  CEP83-AS1 - 12q22 [CytoView hg38]
Mapping of homologs : NCBICEP83-AS1 [Mapview hg19]  CEP83-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057269 BC035086 BC044616
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP83-AS1
Cluster EST : UnigeneHs.118205 [ NCBI ]
CGAP (NCI)Hs.118205
Alternative Splicing GalleryENSG00000278916
Gene ExpressionCEP83-AS1 [ NCBI-GEO ]   CEP83-AS1 [ EBI - ARRAY_EXPRESS ]   CEP83-AS1 [ SEEK ]   CEP83-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP83-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)144486
GTEX Portal (Tissue expression)CEP83-AS1
Human Protein AtlasENSG00000278916-CEP83-AS1 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CEP83-AS1
DMDM Disease mutations144486
Blocks (Seattle)CEP83-AS1
Human Protein Atlas [tissue]ENSG00000278916-CEP83-AS1 [tissue]
Protein Interaction databases
FunCoupENSG00000278916
BioGRIDCEP83-AS1
STRING (EMBL)CEP83-AS1
ZODIACCEP83-AS1
Ontologies - Pathways
Huge Navigator CEP83-AS1 [HugePedia]
snp3D : Map Gene to Disease144486
BioCentury BCIQCEP83-AS1
ClinGenCEP83-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD144486
Clinical trialCEP83-AS1
Miscellaneous
canSAR (ICR)CEP83-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP83-AS1
EVEXCEP83-AS1
GoPubMedCEP83-AS1
iHOPCEP83-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:25:58 CET 2017

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