Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CEP95 (centrosomal protein 95)

Identity

Alias_namesCCDC45
coiled-coil domain containing 45
centrosomal protein 95kDa
Alias_symbol (synonym)DKFZp667E1824
Other alias
HGNC (Hugo) CEP95
LocusID (NCBI) 90799
Atlas_Id 61734
Location 17q23.3  [Link to chromosome band 17q23]
Location_base_pair Starts at 64506736 and ends at 64537951 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CEP95 (17q23.3) / ARL15 (5q11.2)CEP95 (17q23.3) / RBM11 (21q11.2)CEP95 (17q23.3) / SMURF2 (17q23.3)
CEP95 (17q23.3) / TBL1X (Xp22.31)CEP95 (17q23.3) / XRCC5 (2q35)MED24 (17q21.1) / CEP95 (17q23.3)
SFPQ (16q24.1) / CEP95 (17q23.3)SMARCC2 (12q13.2) / CEP95 (17q23.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP95   25141
Cards
Entrez_Gene (NCBI)CEP95  90799  centrosomal protein 95
AliasesCCDC45
GeneCards (Weizmann)CEP95
Ensembl hg19 (Hinxton)ENSG00000258890 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000258890 [Gene_View]  chr17:64506736-64537951 [Contig_View]  CEP95 [Vega]
ICGC DataPortalENSG00000258890
TCGA cBioPortalCEP95
AceView (NCBI)CEP95
Genatlas (Paris)CEP95
WikiGenes90799
SOURCE (Princeton)CEP95
Genetics Home Reference (NIH)CEP95
Genomic and cartography
GoldenPath hg38 (UCSC)CEP95  -     chr17:64506736-64537951 +  17q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP95  -     17q23.3   [Description]    (hg19-Feb_2009)
EnsemblCEP95 - 17q23.3 [CytoView hg19]  CEP95 - 17q23.3 [CytoView hg38]
Mapping of homologs : NCBICEP95 [Mapview hg19]  CEP95 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI379016 AK057326 AK290587 AK297409 AK316257
RefSeq transcript (Entrez)NM_001316990 NM_138363
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP95
Cluster EST : UnigeneHs.569713 [ NCBI ]
CGAP (NCI)Hs.569713
Alternative Splicing GalleryENSG00000258890
Gene ExpressionCEP95 [ NCBI-GEO ]   CEP95 [ EBI - ARRAY_EXPRESS ]   CEP95 [ SEEK ]   CEP95 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP95 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)90799
GTEX Portal (Tissue expression)CEP95
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96GE4   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96GE4  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96GE4
Splice isoforms : SwissVarQ96GE4
PhosPhoSitePlusQ96GE4
Domains : Interpro (EBI)CEP95    CH-domain   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CEP95
DMDM Disease mutations90799
Blocks (Seattle)CEP95
SuperfamilyQ96GE4
Human Protein AtlasENSG00000258890
Peptide AtlasQ96GE4
HPRD11279
IPIIPI00305518   IPI01012774   IPI00553130   
Protein Interaction databases
DIP (DOE-UCLA)Q96GE4
IntAct (EBI)Q96GE4
FunCoupENSG00000258890
BioGRIDCEP95
STRING (EMBL)CEP95
ZODIACCEP95
Ontologies - Pathways
QuickGOQ96GE4
Ontology : AmiGOspindle pole  protein binding  cytoplasm  centrosome  
Ontology : EGO-EBIspindle pole  protein binding  cytoplasm  centrosome  
NDEx NetworkCEP95
Atlas of Cancer Signalling NetworkCEP95
Wikipedia pathwaysCEP95
Orthology - Evolution
OrthoDB90799
GeneTree (enSembl)ENSG00000258890
Phylogenetic Trees/Animal Genes : TreeFamCEP95
HOVERGENQ96GE4
HOGENOMQ96GE4
Homologs : HomoloGeneCEP95
Homology/Alignments : Family Browser (UCSC)CEP95
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP95 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP95
dbVarCEP95
ClinVarCEP95
1000_GenomesCEP95 
Exome Variant ServerCEP95
ExAC (Exome Aggregation Consortium)CEP95 (select the gene name)
Genetic variants : HAPMAP90799
Genomic Variants (DGV)CEP95 [DGVbeta]
DECIPHERCEP95 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP95 
Mutations
ICGC Data PortalCEP95 
TCGA Data PortalCEP95 
Broad Tumor PortalCEP95
OASIS PortalCEP95 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP95  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP95
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP95
DgiDB (Drug Gene Interaction Database)CEP95
DoCM (Curated mutations)CEP95 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP95 (select a term)
intoGenCEP95
Cancer3DCEP95(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCEP95
Genetic Testing Registry CEP95
NextProtQ96GE4 [Medical]
TSGene90799
GENETestsCEP95
Target ValidationCEP95
Huge Navigator CEP95 [HugePedia]
snp3D : Map Gene to Disease90799
BioCentury BCIQCEP95
ClinGenCEP95
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD90799
Chemical/Pharm GKB GenePA142672162
Clinical trialCEP95
Miscellaneous
canSAR (ICR)CEP95 (select the gene name)
Probes
Litterature
PubMed14 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP95
EVEXCEP95
GoPubMedCEP95
iHOPCEP95
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:04:37 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.