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CEP97 (centrosomal protein 97)

Identity

Alias_namesLRRIQ2
leucine-rich repeats and IQ motif containing 2
centrosomal protein 97kDa
Alias_symbol (synonym)FLJ23047
Other alias2810403B08Rik
HGNC (Hugo) CEP97
LocusID (NCBI) 79598
Atlas_Id 61735
Location 3q12.3  [Link to chromosome band 3q12]
Location_base_pair Starts at 101724593 and ends at 101770562 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CEP97   26244
Cards
Entrez_Gene (NCBI)CEP97  79598  centrosomal protein 97
Aliases2810403B08Rik; LRRIQ2
GeneCards (Weizmann)CEP97
Ensembl hg19 (Hinxton)ENSG00000182504 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000182504 [Gene_View]  chr3:101724593-101770562 [Contig_View]  CEP97 [Vega]
ICGC DataPortalENSG00000182504
TCGA cBioPortalCEP97
AceView (NCBI)CEP97
Genatlas (Paris)CEP97
WikiGenes79598
SOURCE (Princeton)CEP97
Genetics Home Reference (NIH)CEP97
Genomic and cartography
GoldenPath hg38 (UCSC)CEP97  -     chr3:101724593-101770562 +  3q12.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CEP97  -     3q12.3   [Description]    (hg19-Feb_2009)
EnsemblCEP97 - 3q12.3 [CytoView hg19]  CEP97 - 3q12.3 [CytoView hg38]
Mapping of homologs : NCBICEP97 [Mapview hg19]  CEP97 [Mapview hg38]
OMIM615864   
Gene and transcription
Genbank (Entrez)AK026700 AK093100 AK225573 AK294784 AK309806
RefSeq transcript (Entrez)NM_001303401 NM_024548
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CEP97
Cluster EST : UnigeneHs.444135 [ NCBI ]
CGAP (NCI)Hs.444135
Alternative Splicing GalleryENSG00000182504
Gene ExpressionCEP97 [ NCBI-GEO ]   CEP97 [ EBI - ARRAY_EXPRESS ]   CEP97 [ SEEK ]   CEP97 [ MEM ]
Gene Expression Viewer (FireBrowse)CEP97 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79598
GTEX Portal (Tissue expression)CEP97
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IW35   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IW35  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IW35
Splice isoforms : SwissVarQ8IW35
PhosPhoSitePlusQ8IW35
Domaine pattern : Prosite (Expaxy)IQ (PS50096)    LRR (PS51450)   
Domains : Interpro (EBI)IQ_motif_EF-hand-BS    L_dom-like    Leu-rich_rpt   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CEP97
DMDM Disease mutations79598
Blocks (Seattle)CEP97
SuperfamilyQ8IW35
Human Protein AtlasENSG00000182504
Peptide AtlasQ8IW35
HPRD08014
IPIIPI00383439   IPI00238469   IPI00910764   IPI00947053   IPI00946878   
Protein Interaction databases
DIP (DOE-UCLA)Q8IW35
IntAct (EBI)Q8IW35
FunCoupENSG00000182504
BioGRIDCEP97
STRING (EMBL)CEP97
ZODIACCEP97
Ontologies - Pathways
QuickGOQ8IW35
Ontology : AmiGOprotein binding  calmodulin binding  centrosome  microtubule organizing center  cytosol  cytosol  protein complex  ciliary basal body docking  regulation of mitotic spindle assembly  negative regulation of cilium assembly  
Ontology : EGO-EBIprotein binding  calmodulin binding  centrosome  microtubule organizing center  cytosol  cytosol  protein complex  ciliary basal body docking  regulation of mitotic spindle assembly  negative regulation of cilium assembly  
NDEx NetworkCEP97
Atlas of Cancer Signalling NetworkCEP97
Wikipedia pathwaysCEP97
Orthology - Evolution
OrthoDB79598
GeneTree (enSembl)ENSG00000182504
Phylogenetic Trees/Animal Genes : TreeFamCEP97
HOVERGENQ8IW35
HOGENOMQ8IW35
Homologs : HomoloGeneCEP97
Homology/Alignments : Family Browser (UCSC)CEP97
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCEP97 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CEP97
dbVarCEP97
ClinVarCEP97
1000_GenomesCEP97 
Exome Variant ServerCEP97
ExAC (Exome Aggregation Consortium)CEP97 (select the gene name)
Genetic variants : HAPMAP79598
Genomic Variants (DGV)CEP97 [DGVbeta]
DECIPHERCEP97 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCEP97 
Mutations
ICGC Data PortalCEP97 
TCGA Data PortalCEP97 
Broad Tumor PortalCEP97
OASIS PortalCEP97 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCEP97  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCEP97
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CEP97
DgiDB (Drug Gene Interaction Database)CEP97
DoCM (Curated mutations)CEP97 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CEP97 (select a term)
intoGenCEP97
Cancer3DCEP97(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615864   
Orphanet
MedgenCEP97
Genetic Testing Registry CEP97
NextProtQ8IW35 [Medical]
TSGene79598
GENETestsCEP97
Target ValidationCEP97
Huge Navigator CEP97 [HugePedia]
snp3D : Map Gene to Disease79598
BioCentury BCIQCEP97
ClinGenCEP97
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79598
Chemical/Pharm GKB GenePA162382176
Clinical trialCEP97
Miscellaneous
canSAR (ICR)CEP97 (select the gene name)
Probes
Litterature
PubMed28 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCEP97
EVEXCEP97
GoPubMedCEP97
iHOPCEP97
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic seazch ij pubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:37 CEST 2017

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