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CERNA1 (competing endogenous lncRNA 1 for miR-4707-5p and miR-4767)

Identity

Alias_symbol (synonym)LOC100129973
Other alias-
HGNC (Hugo) CERNA1
LocusID (NCBI) 100129973
Atlas_Id 79136
Location 15q21.2  [Link to chromosome band 15q21]
Location_base_pair Starts at 52180026 and ends at 52205879 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CERNA1   52664
Cards
Entrez_Gene (NCBI)CERNA1  100129973  competing endogenous lncRNA 1 for miR-4707-5p and miR-4767
Aliases
GeneCards (Weizmann)CERNA1
Ensembl hg19 (Hinxton)ENSG00000259577 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259577 [Gene_View]  chr15:52180026-52205879 [Contig_View]  CERNA1 [Vega]
ICGC DataPortalENSG00000259577
TCGA cBioPortalCERNA1
AceView (NCBI)CERNA1
Genatlas (Paris)CERNA1
WikiGenes100129973
SOURCE (Princeton)CERNA1
Genetics Home Reference (NIH)CERNA1
Genomic and cartography
GoldenPath hg38 (UCSC)CERNA1  -     chr15:52180026-52205879 +  15q21.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CERNA1  -     15q21.2   [Description]    (hg19-Feb_2009)
EnsemblCERNA1 - 15q21.2 [CytoView hg19]  CERNA1 - 15q21.2 [CytoView hg38]
Mapping of homologs : NCBICERNA1 [Mapview hg19]  CERNA1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF007131 CD105583
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CERNA1
Cluster EST : UnigeneHs.569494 [ NCBI ]
CGAP (NCI)Hs.569494
Alternative Splicing GalleryENSG00000259577
Gene ExpressionCERNA1 [ NCBI-GEO ]   CERNA1 [ EBI - ARRAY_EXPRESS ]   CERNA1 [ SEEK ]   CERNA1 [ MEM ]
Gene Expression Viewer (FireBrowse)CERNA1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100129973
GTEX Portal (Tissue expression)CERNA1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CERNA1
DMDM Disease mutations100129973
Blocks (Seattle)CERNA1
Human Protein AtlasENSG00000259577
IPIIPI00745453   
Protein Interaction databases
FunCoupENSG00000259577
BioGRIDCERNA1
STRING (EMBL)CERNA1
ZODIACCERNA1
Ontologies - Pathways
Huge Navigator CERNA1 [HugePedia]
snp3D : Map Gene to Disease100129973
BioCentury BCIQCERNA1
ClinGenCERNA1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100129973
Clinical trialCERNA1
Miscellaneous
canSAR (ICR)CERNA1 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCERNA1
EVEXCERNA1
GoPubMedCERNA1
iHOPCERNA1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Sep 18 13:04:38 CEST 2017

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