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CFAP206 (cilia and flagella associated protein 206)

Identity

Alias_namesC6orf165
chromosome 6 open reading frame 165
Alias_symbol (synonym)FLJ25974
dJ382I10.1
Other alias
HGNC (Hugo) CFAP206
LocusID (NCBI) 154313
Atlas_Id 77822
Location 6q15  [Link to chromosome band 6q15]
Location_base_pair Starts at 87407972 and ends at 87464473 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CCNF (16p13.3) / CFAP206 (6q15)HSCB (22q12.1) / CFAP206 (6q15)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CFAP206   21405
Cards
Entrez_Gene (NCBI)CFAP206  154313  cilia and flagella associated protein 206
AliasesC6orf165; dJ382I10.1
GeneCards (Weizmann)CFAP206
Ensembl hg19 (Hinxton)ENSG00000213204 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000213204 [Gene_View]  ENSG00000213204 [Sequence]  chr6:87407972-87464473 [Contig_View]  CFAP206 [Vega]
ICGC DataPortalENSG00000213204
TCGA cBioPortalCFAP206
AceView (NCBI)CFAP206
Genatlas (Paris)CFAP206
WikiGenes154313
SOURCE (Princeton)CFAP206
Genetics Home Reference (NIH)CFAP206
Genomic and cartography
GoldenPath hg38 (UCSC)CFAP206  -     chr6:87407972-87464473 +  6q15   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CFAP206  -     6q15   [Description]    (hg19-Feb_2009)
EnsemblCFAP206 - 6q15 [CytoView hg19]  CFAP206 - 6q15 [CytoView hg38]
Mapping of homologs : NCBICFAP206 [Mapview hg19]  CFAP206 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK093830 AK098840 BC035083 BC045171 DB021694
RefSeq transcript (Entrez)NM_001031743 NM_178823
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CFAP206
Cluster EST : UnigeneHs.82921 [ NCBI ]
CGAP (NCI)Hs.82921
Alternative Splicing GalleryENSG00000213204
Gene ExpressionCFAP206 [ NCBI-GEO ]   CFAP206 [ EBI - ARRAY_EXPRESS ]   CFAP206 [ SEEK ]   CFAP206 [ MEM ]
Gene Expression Viewer (FireBrowse)CFAP206 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)154313
GTEX Portal (Tissue expression)CFAP206
Human Protein AtlasENSG00000213204-CFAP206 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IYR0   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IYR0  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IYR0
Splice isoforms : SwissVarQ8IYR0
PhosPhoSitePlusQ8IYR0
Domains : Interpro (EBI)FAP206   
Domain families : Pfam (Sanger)DUF3508 (PF12018)   
Domain families : Pfam (NCBI)pfam12018   
Conserved Domain (NCBI)CFAP206
DMDM Disease mutations154313
Blocks (Seattle)CFAP206
SuperfamilyQ8IYR0
Human Protein Atlas [tissue]ENSG00000213204-CFAP206 [tissue]
Peptide AtlasQ8IYR0
HPRD12863
IPIIPI00339242   IPI00967413   IPI00964857   
Protein Interaction databases
DIP (DOE-UCLA)Q8IYR0
IntAct (EBI)Q8IYR0
FunCoupENSG00000213204
BioGRIDCFAP206
STRING (EMBL)CFAP206
ZODIACCFAP206
Ontologies - Pathways
QuickGOQ8IYR0
Ontology : AmiGOradial spoke  cilium movement  protein binding  cytoplasm  motile cilium  axoneme assembly  A axonemal microtubule  
Ontology : EGO-EBIradial spoke  cilium movement  protein binding  cytoplasm  motile cilium  axoneme assembly  A axonemal microtubule  
NDEx NetworkCFAP206
Atlas of Cancer Signalling NetworkCFAP206
Wikipedia pathwaysCFAP206
Orthology - Evolution
OrthoDB154313
GeneTree (enSembl)ENSG00000213204
Phylogenetic Trees/Animal Genes : TreeFamCFAP206
HOVERGENQ8IYR0
HOGENOMQ8IYR0
Homologs : HomoloGeneCFAP206
Homology/Alignments : Family Browser (UCSC)CFAP206
Gene fusions - Rearrangements
Fusion : QuiverCFAP206
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCFAP206 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CFAP206
dbVarCFAP206
ClinVarCFAP206
1000_GenomesCFAP206 
Exome Variant ServerCFAP206
ExAC (Exome Aggregation Consortium)ENSG00000213204
GNOMAD BrowserENSG00000213204
Varsome BrowserCFAP206
Genetic variants : HAPMAP154313
Genomic Variants (DGV)CFAP206 [DGVbeta]
DECIPHERCFAP206 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCFAP206 
Mutations
ICGC Data PortalCFAP206 
TCGA Data PortalCFAP206 
Broad Tumor PortalCFAP206
OASIS PortalCFAP206 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCFAP206
BioMutasearch CFAP206
DgiDB (Drug Gene Interaction Database)CFAP206
DoCM (Curated mutations)CFAP206 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CFAP206 (select a term)
intoGenCFAP206
Cancer3DCFAP206(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCFAP206
MedgenCFAP206
Genetic Testing Registry CFAP206
NextProtQ8IYR0 [Medical]
TSGene154313
GENETestsCFAP206
Target ValidationCFAP206
Huge Navigator CFAP206 [HugePedia]
snp3D : Map Gene to Disease154313
BioCentury BCIQCFAP206
ClinGenCFAP206
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD154313
Chemical/Pharm GKB GenePA134983540
Clinical trialCFAP206
Miscellaneous
canSAR (ICR)CFAP206 (select the gene name)
Probes
Litterature
PubMed11 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCFAP206
EVEXCFAP206
GoPubMedCFAP206
iHOPCFAP206
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Jul 30 13:40:27 CEST 2018

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