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CFAP298 (cilia and flagella associated protein 298)

Identity

Alias (NCBI)C21orf48
C21orf59
CILD26
FBB18
Kur
HGNC (Hugo) CFAP298
LocusID (NCBI) 56683
Atlas_Id 80364
Location 21q22.11  [Link to chromosome band 21q22]
Location_base_pair Starts at 32599356 and ends at 32612871 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CFAP298   1301
Cards
Entrez_Gene (NCBI)CFAP298  56683  cilia and flagella associated protein 298
AliasesC21orf48; C21orf59; CILD26; FBB18; 
Kur
GeneCards (Weizmann)CFAP298
Ensembl hg19 (Hinxton)ENSG00000159079 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000159079 [Gene_View]  ENSG00000159079 [Sequence]  chr21:32599356-32612871 [Contig_View]  CFAP298 [Vega]
ICGC DataPortalENSG00000159079
TCGA cBioPortalCFAP298
AceView (NCBI)CFAP298
Genatlas (Paris)CFAP298
WikiGenes56683
SOURCE (Princeton)CFAP298
Genetics Home Reference (NIH)CFAP298
Genomic and cartography
GoldenPath hg38 (UCSC)CFAP298  -     chr21:32599356-32612871 -  21q22.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CFAP298  -     21q22.11   [Description]    (hg19-Feb_2009)
GoldenPathCFAP298 - 21q22.11 [CytoView hg19]  CFAP298 - 21q22.11 [CytoView hg38]
ImmunoBaseENSG00000159079
genome Data Viewer NCBICFAP298 [Mapview hg19]  
OMIM615494   615500   
Gene and transcription
Genbank (Entrez)AF282851 AK000474 AK055328 AK094456 AK097566
RefSeq transcript (Entrez)NM_001350334 NM_001350335 NM_001350336 NM_001350337 NM_017835 NM_021254
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CFAP298
Alternative Splicing GalleryENSG00000159079
Gene ExpressionCFAP298 [ NCBI-GEO ]   CFAP298 [ EBI - ARRAY_EXPRESS ]   CFAP298 [ SEEK ]   CFAP298 [ MEM ]
Gene Expression Viewer (FireBrowse)CFAP298 [ Firebrowse - Broad ]
GenevisibleExpression of CFAP298 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)56683
GTEX Portal (Tissue expression)CFAP298
Human Protein AtlasENSG00000159079-CFAP298 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP57076   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP57076  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP57076
Splice isoforms : SwissVarP57076
PhosPhoSitePlusP57076
Domains : Interpro (EBI)CFAP298   
Domain families : Pfam (Sanger)DUF2870 (PF11069)   
Domain families : Pfam (NCBI)pfam11069   
Conserved Domain (NCBI)CFAP298
DMDM Disease mutations56683
Blocks (Seattle)CFAP298
SuperfamilyP57076
Human Protein Atlas [tissue]ENSG00000159079-CFAP298 [tissue]
Peptide AtlasP57076
IPIIPI00025710   IPI01009719   IPI01022500   IPI00289348   IPI00658069   IPI00658020   IPI00793717   IPI00795528   IPI00016411   IPI00926044   IPI00926259   
Protein Interaction databases
DIP (DOE-UCLA)P57076
IntAct (EBI)P57076
FunCoupENSG00000159079
BioGRIDCFAP298
STRING (EMBL)CFAP298
ZODIACCFAP298
Ontologies - Pathways
QuickGOP57076
Ontology : AmiGOregulation of cilium movement  regulation of cilium movement  protein binding  nucleus  cytosol  cytoskeleton  cilium  cilium assembly  
Ontology : EGO-EBIregulation of cilium movement  regulation of cilium movement  protein binding  nucleus  cytosol  cytoskeleton  cilium  cilium assembly  
NDEx NetworkCFAP298
Atlas of Cancer Signalling NetworkCFAP298
Wikipedia pathwaysCFAP298
Orthology - Evolution
OrthoDB56683
GeneTree (enSembl)ENSG00000159079
Phylogenetic Trees/Animal Genes : TreeFamCFAP298
HOGENOMP57076
Homologs : HomoloGeneCFAP298
Homology/Alignments : Family Browser (UCSC)CFAP298
Gene fusions - Rearrangements
Fusion : QuiverCFAP298
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCFAP298 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CFAP298
dbVarCFAP298
ClinVarCFAP298
1000_GenomesCFAP298 
Exome Variant ServerCFAP298
GNOMAD BrowserENSG00000159079
Varsome BrowserCFAP298
Genetic variants : HAPMAP56683
Genomic Variants (DGV)CFAP298 [DGVbeta]
DECIPHERCFAP298 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCFAP298 
Mutations
ICGC Data PortalCFAP298 
TCGA Data PortalCFAP298 
Broad Tumor PortalCFAP298
OASIS PortalCFAP298 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCFAP298  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCFAP298
Mutations and Diseases : HGMDCFAP298
BioMutasearch CFAP298
DgiDB (Drug Gene Interaction Database)CFAP298
DoCM (Curated mutations)CFAP298 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CFAP298 (select a term)
intoGenCFAP298
Cancer3DCFAP298(select the gene name)
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM615494    615500   
Orphanet
DisGeNETCFAP298
MedgenCFAP298
Genetic Testing Registry CFAP298
NextProtP57076 [Medical]
TSGene56683
GENETestsCFAP298
Target ValidationCFAP298
Huge Navigator CFAP298 [HugePedia]
snp3D : Map Gene to Disease56683
BioCentury BCIQCFAP298
ClinGenCFAP298
Clinical trials, drugs, therapy
Protein Interactions : CTD56683
Pharm GKB GenePA25854
Clinical trialCFAP298
Miscellaneous
canSAR (ICR)CFAP298 (select the gene name)
HarmonizomeCFAP298
DataMed IndexCFAP298
Probes
Litterature
PubMed24 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCFAP298
EVEXCFAP298
GoPubMedCFAP298
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Aug 22 19:08:29 CEST 2020

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