Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CFAP58-AS1 (CFAP58 antisense RNA 1 (head to head))

Identity

Alias_namesCCDC147-AS1
CCDC147 antisense RNA 1
CCDC147 antisense RNA 1 (head to head)
Other alias
HGNC (Hugo) CFAP58-AS1
LocusID (NCBI) 100505869
Atlas_Id 77057
Location 10q25.1  [Link to chromosome band 10q25]
Location_base_pair Starts at 104351301 and ends at 104353575 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CFAP58-AS1   45243
Cards
Entrez_Gene (NCBI)CFAP58-AS1  100505869  CFAP58 antisense RNA 1 (head to head)
AliasesCCDC147-AS1
GeneCards (Weizmann)CFAP58-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:104351301-104353575 [Contig_View]  CFAP58-AS1 [Vega]
TCGA cBioPortalCFAP58-AS1
AceView (NCBI)CFAP58-AS1
Genatlas (Paris)CFAP58-AS1
WikiGenes100505869
SOURCE (Princeton)CFAP58-AS1
Genetics Home Reference (NIH)CFAP58-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CFAP58-AS1  -     chr10:104351301-104353575 -  10q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CFAP58-AS1  -     10q25.1   [Description]    (hg19-Feb_2009)
EnsemblCFAP58-AS1 - 10q25.1 [CytoView hg19]  CFAP58-AS1 - 10q25.1 [CytoView hg38]
Mapping of homologs : NCBICFAP58-AS1 [Mapview hg19]  CFAP58-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI765761 BG204753 BX093559 DB258473
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CFAP58-AS1
Cluster EST : UnigeneHs.338140 [ NCBI ]
CGAP (NCI)Hs.338140
Gene ExpressionCFAP58-AS1 [ NCBI-GEO ]   CFAP58-AS1 [ EBI - ARRAY_EXPRESS ]   CFAP58-AS1 [ SEEK ]   CFAP58-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CFAP58-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100505869
GTEX Portal (Tissue expression)CFAP58-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CFAP58-AS1
DMDM Disease mutations100505869
Blocks (Seattle)CFAP58-AS1
Protein Interaction databases
BioGRIDCFAP58-AS1
STRING (EMBL)CFAP58-AS1
ZODIACCFAP58-AS1
Ontologies - Pathways
Huge Navigator CFAP58-AS1 [HugePedia]
snp3D : Map Gene to Disease100505869
BioCentury BCIQCFAP58-AS1
ClinGenCFAP58-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100505869
Clinical trialCFAP58-AS1
Miscellaneous
canSAR (ICR)CFAP58-AS1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCFAP58-AS1
EVEXCFAP58-AS1
GoPubMedCFAP58-AS1
iHOPCFAP58-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 13:21:21 CET 2017

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