Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CFAP65 (cilia and flagella associated protein 65)

Identity

Alias_namesCCDC108
coiled-coil domain containing 108
Alias_symbol (synonym)DKFZp434O0527
MGC35338
Other alias
HGNC (Hugo) CFAP65
LocusID (NCBI) 255101
Atlas_Id 77823
Location 2q35  [Link to chromosome band 2q35]
Location_base_pair Starts at 219891270 and ends at 219906273 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)CFAP65   25325
Cards
Entrez_Gene (NCBI)CFAP65  255101  cilia and flagella associated protein 65
AliasesCCDC108
GeneCards (Weizmann)CFAP65
Ensembl hg19 (Hinxton)ENSG00000181378 [Gene_View]  chr2:219891270-219906273 [Contig_View]  CFAP65 [Vega]
Ensembl hg38 (Hinxton)ENSG00000181378 [Gene_View]  chr2:219891270-219906273 [Contig_View]  CFAP65 [Vega]
ICGC DataPortalENSG00000181378
TCGA cBioPortalCFAP65
AceView (NCBI)CFAP65
Genatlas (Paris)CFAP65
WikiGenes255101
SOURCE (Princeton)CFAP65
Genetics Home Reference (NIH)CFAP65
Genomic and cartography
GoldenPath hg19 (UCSC)CFAP65  -     chr2:219891270-219906273 -  2q35   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CFAP65  -     2q35   [Description]    (hg38-Dec_2013)
EnsemblCFAP65 - 2q35 [CytoView hg19]  CFAP65 - 2q35 [CytoView hg38]
Mapping of homologs : NCBICFAP65 [Mapview hg19]  CFAP65 [Mapview hg38]
OMIM614270   
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001278295 NM_001278296 NM_152389 NM_194302
RefSeq genomic (Entrez)NC_000002 NC_018913 NT_005403 NW_004929305
Consensus coding sequences : CCDS (NCBI)CFAP65
Cluster EST : UnigeneHs.147762 [ NCBI ]
CGAP (NCI)Hs.147762
Alternative Splicing GalleryENSG00000181378
Gene ExpressionCFAP65 [ NCBI-GEO ]   CFAP65 [ EBI - ARRAY_EXPRESS ]   CFAP65 [ SEEK ]   CFAP65 [ MEM ]
Gene Expression Viewer (FireBrowse)CFAP65 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)255101
GTEX Portal (Tissue expression)CFAP65
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CFAP65
DMDM Disease mutations255101
Blocks (Seattle)CFAP65
Human Protein AtlasENSG00000181378
HPRD13201
IPIIPI00746946   IPI01015199   IPI00657672   IPI00916462   IPI00645641   IPI00916250   IPI00916886   IPI00926224   IPI00925613   
Protein Interaction databases
FunCoupENSG00000181378
BioGRIDCFAP65
STRING (EMBL)CFAP65
ZODIACCFAP65
Ontologies - Pathways
Huge Navigator CFAP65 [HugePedia]
snp3D : Map Gene to Disease255101
BioCentury BCIQCFAP65
ClinGenCFAP65
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD255101
Chemical/Pharm GKB GenePA145008681
Clinical trialCFAP65
Miscellaneous
canSAR (ICR)CFAP65 (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCFAP65
EVEXCFAP65
GoPubMedCFAP65
iHOPCFAP65
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:18 CET 2017

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