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CFAP69 (cilia and flagella associated protein 69)

Identity

Alias_namesC7orf63
chromosome 7 open reading frame 63
Alias_symbol (synonym)FLJ21062
FAP69
Other alias
HGNC (Hugo) CFAP69
LocusID (NCBI) 79846
Atlas_Id 54841
Location 7q21.13  [Link to chromosome band 7q21]
Location_base_pair Starts at 90245174 and ends at 90311063 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CFAP69 (7q21.13) / CFAP69 (7q21.13)CFAP69 (7q21.13) / STEAP1 (7q21.13)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CFAP69   26107
Cards
Entrez_Gene (NCBI)CFAP69  79846  cilia and flagella associated protein 69
AliasesC7orf63; FAP69
GeneCards (Weizmann)CFAP69
Ensembl hg19 (Hinxton)ENSG00000105792 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105792 [Gene_View]  chr7:90245174-90311063 [Contig_View]  CFAP69 [Vega]
ICGC DataPortalENSG00000105792
TCGA cBioPortalCFAP69
AceView (NCBI)CFAP69
Genatlas (Paris)CFAP69
WikiGenes79846
SOURCE (Princeton)CFAP69
Genetics Home Reference (NIH)CFAP69
Genomic and cartography
GoldenPath hg38 (UCSC)CFAP69  -     chr7:90245174-90311063 +  7q21.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CFAP69  -     7q21.13   [Description]    (hg19-Feb_2009)
EnsemblCFAP69 - 7q21.13 [CytoView hg19]  CFAP69 - 7q21.13 [CytoView hg38]
Mapping of homologs : NCBICFAP69 [Mapview hg19]  CFAP69 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK024715 AK093991 AK302636 AK303034 AL137642
RefSeq transcript (Entrez)NM_001039706 NM_001160138 NM_024788
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CFAP69
Cluster EST : UnigeneHs.657403 [ NCBI ]
CGAP (NCI)Hs.657403
Alternative Splicing GalleryENSG00000105792
Gene ExpressionCFAP69 [ NCBI-GEO ]   CFAP69 [ EBI - ARRAY_EXPRESS ]   CFAP69 [ SEEK ]   CFAP69 [ MEM ]
Gene Expression Viewer (FireBrowse)CFAP69 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79846
GTEX Portal (Tissue expression)CFAP69
Protein : pattern, domain, 3D structure
UniProt/SwissProtA5D8W1   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtA5D8W1  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProA5D8W1
Splice isoforms : SwissVarA5D8W1
PhosPhoSitePlusA5D8W1
Domains : Interpro (EBI)ARM-like    ARM-type_fold   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CFAP69
DMDM Disease mutations79846
Blocks (Seattle)CFAP69
SuperfamilyA5D8W1
Human Protein AtlasENSG00000105792
Peptide AtlasA5D8W1
HPRD08633
IPIIPI00411697   IPI00015625   IPI00878723   IPI00885044   IPI00922566   IPI00185149   IPI00658117   IPI00658119   IPI00853214   IPI01014666   
Protein Interaction databases
DIP (DOE-UCLA)A5D8W1
IntAct (EBI)A5D8W1
FunCoupENSG00000105792
BioGRIDCFAP69
STRING (EMBL)CFAP69
ZODIACCFAP69
Ontologies - Pathways
QuickGOA5D8W1
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCFAP69
Atlas of Cancer Signalling NetworkCFAP69
Wikipedia pathwaysCFAP69
Orthology - Evolution
OrthoDB79846
GeneTree (enSembl)ENSG00000105792
Phylogenetic Trees/Animal Genes : TreeFamCFAP69
HOVERGENA5D8W1
HOGENOMA5D8W1
Homologs : HomoloGeneCFAP69
Homology/Alignments : Family Browser (UCSC)CFAP69
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCFAP69 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CFAP69
dbVarCFAP69
ClinVarCFAP69
1000_GenomesCFAP69 
Exome Variant ServerCFAP69
ExAC (Exome Aggregation Consortium)CFAP69 (select the gene name)
Genetic variants : HAPMAP79846
Genomic Variants (DGV)CFAP69 [DGVbeta]
DECIPHERCFAP69 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCFAP69 
Mutations
ICGC Data PortalCFAP69 
TCGA Data PortalCFAP69 
Broad Tumor PortalCFAP69
OASIS PortalCFAP69 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCFAP69
BioMutasearch CFAP69
DgiDB (Drug Gene Interaction Database)CFAP69
DoCM (Curated mutations)CFAP69 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CFAP69 (select a term)
intoGenCFAP69
Cancer3DCFAP69(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCFAP69
Genetic Testing Registry CFAP69
NextProtA5D8W1 [Medical]
TSGene79846
GENETestsCFAP69
Target ValidationCFAP69
Huge Navigator CFAP69 [HugePedia]
snp3D : Map Gene to Disease79846
BioCentury BCIQCFAP69
ClinGenCFAP69
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79846
Chemical/Pharm GKB GenePA162380735
Clinical trialCFAP69
Miscellaneous
canSAR (ICR)CFAP69 (select the gene name)
Probes
Litterature
PubMed5 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCFAP69
EVEXCFAP69
GoPubMedCFAP69
iHOPCFAP69
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Aug 1 16:57:42 CEST 2017

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