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CFAP74 (cilia and flagella associated protein 74)

Identity

Alias_namesC1orf222
KIAA1751
chromosome 1 open reading frame 222
KIAA1751
Alias_symbol (synonym)FLJ45476
Other alias
HGNC (Hugo) CFAP74
LocusID (NCBI) 85452
Atlas_Id 61765
Location 1p36.33  [Link to chromosome band 1p36]
Location_base_pair Starts at 1921951 and ends at 2003837 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CFAP74 (1p36.33) / INS-IGF2 (11p15.5)NADK (1p36.33) / CFAP74 (1p36.33)PTPRF (1p34.2) / CFAP74 (1p36.33)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CFAP74   29368
Cards
Entrez_Gene (NCBI)CFAP74  85452  cilia and flagella associated protein 74
AliasesC1orf222; KIAA1751
GeneCards (Weizmann)CFAP74
Ensembl hg19 (Hinxton)ENSG00000142609 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000142609 [Gene_View]  chr1:1921951-2003837 [Contig_View]  CFAP74 [Vega]
ICGC DataPortalENSG00000142609
TCGA cBioPortalCFAP74
AceView (NCBI)CFAP74
Genatlas (Paris)CFAP74
WikiGenes85452
SOURCE (Princeton)CFAP74
Genetics Home Reference (NIH)CFAP74
Genomic and cartography
GoldenPath hg38 (UCSC)CFAP74  -     chr1:1921951-2003837 -  1p36.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CFAP74  -     1p36.33   [Description]    (hg19-Feb_2009)
EnsemblCFAP74 - 1p36.33 [CytoView hg19]  CFAP74 - 1p36.33 [CytoView hg38]
Mapping of homologs : NCBICFAP74 [Mapview hg19]  CFAP74 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB051538 AK094642 AK127388 AL137547 AW665824
RefSeq transcript (Entrez)NM_001003808 NM_001080484 NM_001304360
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CFAP74
Cluster EST : UnigeneHs.711769 [ NCBI ]
CGAP (NCI)Hs.711769
Alternative Splicing GalleryENSG00000142609
Gene ExpressionCFAP74 [ NCBI-GEO ]   CFAP74 [ EBI - ARRAY_EXPRESS ]   CFAP74 [ SEEK ]   CFAP74 [ MEM ]
Gene Expression Viewer (FireBrowse)CFAP74 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)85452
GTEX Portal (Tissue expression)CFAP74
Human Protein AtlasENSG00000142609-CFAP74 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9C0B2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9C0B2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9C0B2
Splice isoforms : SwissVarQ9C0B2
PhosPhoSitePlusQ9C0B2
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CFAP74
DMDM Disease mutations85452
Blocks (Seattle)CFAP74
SuperfamilyQ9C0B2
Human Protein Atlas [tissue]ENSG00000142609-CFAP74 [tissue]
Peptide AtlasQ9C0B2
IPIIPI00640387   IPI01012358   
Protein Interaction databases
DIP (DOE-UCLA)Q9C0B2
IntAct (EBI)Q9C0B2
FunCoupENSG00000142609
BioGRIDCFAP74
STRING (EMBL)CFAP74
ZODIACCFAP74
Ontologies - Pathways
QuickGOQ9C0B2
Ontology : AmiGOcytoplasm  axoneme  axoneme assembly  
Ontology : EGO-EBIcytoplasm  axoneme  axoneme assembly  
NDEx NetworkCFAP74
Atlas of Cancer Signalling NetworkCFAP74
Wikipedia pathwaysCFAP74
Orthology - Evolution
OrthoDB85452
GeneTree (enSembl)ENSG00000142609
Phylogenetic Trees/Animal Genes : TreeFamCFAP74
HOVERGENQ9C0B2
HOGENOMQ9C0B2
Homologs : HomoloGeneCFAP74
Homology/Alignments : Family Browser (UCSC)CFAP74
Gene fusions - Rearrangements
Tumor Fusion PortalCFAP74
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCFAP74 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CFAP74
dbVarCFAP74
ClinVarCFAP74
1000_GenomesCFAP74 
Exome Variant ServerCFAP74
ExAC (Exome Aggregation Consortium)ENSG00000142609
GNOMAD BrowserENSG00000142609
Genetic variants : HAPMAP85452
Genomic Variants (DGV)CFAP74 [DGVbeta]
DECIPHERCFAP74 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCFAP74 
Mutations
ICGC Data PortalCFAP74 
TCGA Data PortalCFAP74 
Broad Tumor PortalCFAP74
OASIS PortalCFAP74 [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCFAP74
BioMutasearch CFAP74
DgiDB (Drug Gene Interaction Database)CFAP74
DoCM (Curated mutations)CFAP74 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CFAP74 (select a term)
intoGenCFAP74
Cancer3DCFAP74(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
DisGeNETCFAP74
MedgenCFAP74
Genetic Testing Registry CFAP74
NextProtQ9C0B2 [Medical]
TSGene85452
GENETestsCFAP74
Target ValidationCFAP74
Huge Navigator CFAP74 [HugePedia]
snp3D : Map Gene to Disease85452
BioCentury BCIQCFAP74
ClinGenCFAP74
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD85452
Chemical/Pharm GKB GenePA142671598
Clinical trialCFAP74
Miscellaneous
canSAR (ICR)CFAP74 (select the gene name)
Probes
Litterature
PubMed8 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCFAP74
EVEXCFAP74
GoPubMedCFAP74
iHOPCFAP74
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Nov 21 12:59:41 CET 2017

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