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CGB7 (chorionic gonadotropin beta subunit 7)

Identity

Alias_nameschorionic gonadotropin, beta polypeptide 7
Alias_symbol (synonym)CG-beta-a
Other aliasCGB6
HGNC (Hugo) CGB7
LocusID (NCBI) 94027
Atlas_Id 61780
Location 19q13.33  [Link to chromosome band 19q13]
Location_base_pair Starts at 49054274 and ends at 49055740 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CGB7   16451
Cards
Entrez_Gene (NCBI)CGB7  94027  chorionic gonadotropin beta subunit 7
AliasesCG-beta-a; CGB6
GeneCards (Weizmann)CGB7
Ensembl hg19 (Hinxton)ENSG00000196337 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196337 [Gene_View]  chr19:49054274-49055740 [Contig_View]  CGB7 [Vega]
ICGC DataPortalENSG00000196337
TCGA cBioPortalCGB7
AceView (NCBI)CGB7
Genatlas (Paris)CGB7
WikiGenes94027
SOURCE (Princeton)CGB7
Genetics Home Reference (NIH)CGB7
Genomic and cartography
GoldenPath hg38 (UCSC)CGB7  -     chr19:49054274-49055740 -  19q13.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CGB7  -     19q13.33   [Description]    (hg19-Feb_2009)
EnsemblCGB7 - 19q13.33 [CytoView hg19]  CGB7 - 19q13.33 [CytoView hg38]
Mapping of homologs : NCBICGB7 [Mapview hg19]  CGB7 [Mapview hg38]
OMIM608826   
Gene and transcription
Genbank (Entrez)AK092722 AK125108 AK310581 BC160150
RefSeq transcript (Entrez)NM_033142
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CGB7
Cluster EST : UnigeneHs.745468 [ NCBI ]
CGAP (NCI)Hs.745468
Alternative Splicing GalleryENSG00000196337
Gene ExpressionCGB7 [ NCBI-GEO ]   CGB7 [ EBI - ARRAY_EXPRESS ]   CGB7 [ SEEK ]   CGB7 [ MEM ]
Gene Expression Viewer (FireBrowse)CGB7 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)94027
GTEX Portal (Tissue expression)CGB7
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0DN87   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0DN87  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0DN87
Splice isoforms : SwissVarP0DN87
PhosPhoSitePlusP0DN87
Domaine pattern : Prosite (Expaxy)GLYCO_HORMONE_BETA_1 (PS00261)    GLYCO_HORMONE_BETA_2 (PS00689)   
Domains : Interpro (EBI)Cystine-knot_cytokine    Glyco_hormone_CN    Gonadotropin_bsu    Gonadotropin_bsu_CS   
Domain families : Pfam (Sanger)Cys_knot (PF00007)   
Domain families : Pfam (NCBI)pfam00007   
Domain families : Smart (EMBL)GHB (SM00068)  
Conserved Domain (NCBI)CGB7
DMDM Disease mutations94027
Blocks (Seattle)CGB7
SuperfamilyP0DN87
Human Protein AtlasENSG00000196337
Peptide AtlasP0DN87
HPRD12310
Protein Interaction databases
DIP (DOE-UCLA)P0DN87
IntAct (EBI)P0DN87
FunCoupENSG00000196337
BioGRIDCGB7
STRING (EMBL)CGB7
ZODIACCGB7
Ontologies - Pathways
QuickGOP0DN87
Ontology : AmiGOhormone activity  extracellular region  apoptotic process  signal transduction  cell-cell signaling  female gamete generation  
Ontology : EGO-EBIhormone activity  extracellular region  apoptotic process  signal transduction  cell-cell signaling  female gamete generation  
NDEx NetworkCGB7
Atlas of Cancer Signalling NetworkCGB7
Wikipedia pathwaysCGB7
Orthology - Evolution
OrthoDB94027
GeneTree (enSembl)ENSG00000196337
Phylogenetic Trees/Animal Genes : TreeFamCGB7
HOVERGENP0DN87
HOGENOMP0DN87
Homologs : HomoloGeneCGB7
Homology/Alignments : Family Browser (UCSC)CGB7
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCGB7 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CGB7
dbVarCGB7
ClinVarCGB7
1000_GenomesCGB7 
Exome Variant ServerCGB7
ExAC (Exome Aggregation Consortium)CGB7 (select the gene name)
Genetic variants : HAPMAP94027
Genomic Variants (DGV)CGB7 [DGVbeta]
DECIPHERCGB7 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCGB7 
Mutations
ICGC Data PortalCGB7 
TCGA Data PortalCGB7 
Broad Tumor PortalCGB7
OASIS PortalCGB7 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCGB7  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCGB7
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CGB7
DgiDB (Drug Gene Interaction Database)CGB7
DoCM (Curated mutations)CGB7 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CGB7 (select a term)
intoGenCGB7
Cancer3DCGB7(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM608826   
Orphanet
MedgenCGB7
Genetic Testing Registry CGB7
NextProtP0DN87 [Medical]
TSGene94027
GENETestsCGB7
Target ValidationCGB7
Huge Navigator CGB7 [HugePedia]
snp3D : Map Gene to Disease94027
BioCentury BCIQCGB7
ClinGenCGB7
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD94027
Chemical/Pharm GKB GenePA26438
Clinical trialCGB7
Miscellaneous
canSAR (ICR)CGB7 (select the gene name)
Probes
Litterature
PubMed25 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCGB7
EVEXCGB7
GoPubMedCGB7
iHOPCGB7
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 15:43:30 CEST 2017

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