CHAF1B (chromatin assembly factor 1, subunit B (p60))

Identity

Other names	CAF-1
	CAF-IP60
	CAF1
	CAF1A
	CAF1P60
	MPHOSPH7
	MPP7
HGNC	CHAF1B
Location	21q22.2
Location_base_pair	Starts at 36679559 and ends at 36710995 bp from pter ( according to hg18-March_2006).
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CHAF1B   1911
Entrez_Gene	CHAF1B  8208  chromatin assembly factor 1, subunit B (p60)
	Cards
GeneCards	CHAF1B
Ensembl	CHAF1B [Search_View]   ENSG00000159259 [Gene_View]
Genatlas	CHAF1B
GeneLynx	CHAF1B
eGenome	CHAF1B
euGene	8208
	Genomic and cartography
GoldenPath	CHAF1B  -  21q22.2   chr21:36679559-36710995 +  21q22.12   [Description]    (hg18-March_2006)
Ensembl	CHAF1B - 21q22.12 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CHAF1B
	Gene and transcription
Genbank	AK313152 [ ENTREZ ]
Genbank	AL711314 [ ENTREZ ]
Genbank	BC001143 [ ENTREZ ]
Genbank	BC021218 [ ENTREZ ]
Genbank	CR597529 [ ENTREZ ]
RefSeq	NM_005441 [ SRS ]    NM_005441 [ ENTREZ ]
RefSeq	AC_000064 [ SRS ]    AC_000064 [ ENTREZ ]
RefSeq	AC_000153 [ SRS ]    AC_000153 [ ENTREZ ]
RefSeq	NC_000021 [ SRS ]    NC_000021 [ ENTREZ ]
RefSeq	NT_011512 [ SRS ]    NT_011512 [ ENTREZ ]
RefSeq	NW_001838706 [ SRS ]    NW_001838706 [ ENTREZ ]
RefSeq	NW_927384 [ SRS ]    NW_927384 [ ENTREZ ]
AceView	CHAF1B AceView - NCBI
Unigene	Hs.75238 [ SRS ]    Hs.75238 [ NCBI ]     HS75238 [ spliceNest ]
Fast-db	2515 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	Q13112 [ SRS]    Q13112 [ EXPASY ]     Q13112 [ INTERPRO ]     Q13112 [ UNIPROT ]
Prosite	PS00678 WD_REPEATS_1 [ SRS ]    PS00678 WD_REPEATS_1 [ Expasy ]
Prosite	PS50082 WD_REPEATS_2 [ SRS ]    PS50082 WD_REPEATS_2 [ Expasy ]
Prosite	PS50294 WD_REPEATS_REGION [ SRS ]    PS50294 WD_REPEATS_REGION [ Expasy ]
Interpro	IPR001632 Gprotein_B [ SRS ]    IPR001632 Gprotein_B [ EBI ]
Interpro	IPR015943 WD40/YVTN_repeat-like [ SRS ]    IPR015943 WD40/YVTN_repeat-like [ EBI ]
Interpro	IPR001680 WD40_repeat [ SRS ]    IPR001680 WD40_repeat [ EBI ]
CluSTr	Q13112
Pfam	PF00400 WD40 [ SRS ]    PF00400 WD40 [ Sanger ]    pfam00400 [ NCBI-CDD ]
Smart	SM00320 WD40 [EMBL]
Prodom	PD000018 WD40[INRA-Toulouse]
Prodom	Q13112 CAF1B_HUMAN [ Domain structure ]   Q13112 CAF1B_HUMAN  [ sequences sharing at least 1 domain ]
Blocks	Q13112
HPRD	03147
	Protein Interaction databases
DIP	Q13112
IntAct	Q13112
	Polymorphism : SNP, mutations, diseases
OMIM	601245    [ map ]
GENECLINICS	601245
SNP	CHAF1B [dbSNP-NCBI]
SNP	NM_005441 [SNP-NCI]
SNP	CHAF1B [GeneSNPs - Utah]  CHAF1B] [HGBASE - SRS]
HAPMAP	CHAF1B [HAPMAP]
HGMD	CHAF1B
	General knowledge
Family Browser	CHAF1B [UCSC Family Browser]
SOURCE	NM_005441
SMD	Hs.75238
SAGE	Hs.75238
GO	chromatin binding [Amigo]  chromatin binding
GO	nucleus [Amigo]  nucleus
GO	nucleoplasm [Amigo]  nucleoplasm
GO	chromatin assembly complex [Amigo]  chromatin assembly complex
GO	cytoplasm [Amigo]  cytoplasm
GO	cytoplasm [Amigo]  cytoplasm
GO	DNA replication [Amigo]  DNA replication
GO	DNA repair [Amigo]  DNA repair
GO	DNA replication-dependent nucleosome assembly [Amigo]  DNA replication-dependent nucleosome assembly
GO	transcription [Amigo]  transcription
GO	regulation of transcription, DNA-dependent [Amigo]  regulation of transcription, DNA-dependent
GO	protein complex assembly [Amigo]  protein complex assembly
GO	cell cycle [Amigo]  cell cycle
GO	histone binding [Amigo]  histone binding
GO	unfolded protein binding [Amigo]  unfolded protein binding
PubGene	CHAF1B
TreeFam	CHAF1B
CTD	8208 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CHAF1B Related clones (RZPD - Berlin)
	PubMed
PubMed	25 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Tue Oct 14 20:26:34 2008