Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CHEK2P2 (checkpoint kinase 2 pseudogene 2)

Identity

Other alias-
HGNC (Hugo) CHEK2P2
LocusID (NCBI) 646096
Atlas_Id 51905
Location 15q11.1  [Link to chromosome band 15q11]
Location_base_pair Starts at 20282744 and ends at 20291558 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CHEK2P2   43578
Cards
Entrez_Gene (NCBI)CHEK2P2  646096  checkpoint kinase 2 pseudogene 2
Aliases
GeneCards (Weizmann)CHEK2P2
Ensembl hg19 (Hinxton)ENSG00000259156 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259156 [Gene_View]  chr15:20282744-20291558 [Contig_View]  CHEK2P2 [Vega]
ICGC DataPortalENSG00000259156
TCGA cBioPortalCHEK2P2
AceView (NCBI)CHEK2P2
Genatlas (Paris)CHEK2P2
WikiGenes646096
SOURCE (Princeton)CHEK2P2
Genetics Home Reference (NIH)CHEK2P2
Genomic and cartography
GoldenPath hg38 (UCSC)CHEK2P2  -     chr15:20282744-20291558 +  15q11.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CHEK2P2  -     15q11.1   [Description]    (hg19-Feb_2009)
EnsemblCHEK2P2 - 15q11.1 [CytoView hg19]  CHEK2P2 - 15q11.1 [CytoView hg38]
Mapping of homologs : NCBICHEK2P2 [Mapview hg19]  CHEK2P2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX336284 BX336285
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CHEK2P2
Cluster EST : UnigeneHs.448789 [ NCBI ]
CGAP (NCI)Hs.448789
Alternative Splicing GalleryENSG00000259156
Gene ExpressionCHEK2P2 [ NCBI-GEO ]   CHEK2P2 [ EBI - ARRAY_EXPRESS ]   CHEK2P2 [ SEEK ]   CHEK2P2 [ MEM ]
Gene Expression Viewer (FireBrowse)CHEK2P2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646096
GTEX Portal (Tissue expression)CHEK2P2
Human Protein AtlasENSG00000259156-CHEK2P2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CHEK2P2
DMDM Disease mutations646096
Blocks (Seattle)CHEK2P2
Human Protein Atlas [tissue]ENSG00000259156-CHEK2P2 [tissue]
Protein Interaction databases
FunCoupENSG00000259156
BioGRIDCHEK2P2
STRING (EMBL)CHEK2P2
ZODIACCHEK2P2
Ontologies - Pathways
Huge Navigator CHEK2P2 [HugePedia]
snp3D : Map Gene to Disease646096
BioCentury BCIQCHEK2P2
ClinGenCHEK2P2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646096
Clinical trialCHEK2P2
Miscellaneous
canSAR (ICR)CHEK2P2 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCHEK2P2
EVEXCHEK2P2
GoPubMedCHEK2P2
iHOPCHEK2P2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 14:07:37 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.