Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CHKB-AS1 (CHKB antisense RNA 1 (head to head))

Identity

Other alias-
HGNC (Hugo) CHKB-AS1
LocusID (NCBI) 100144603
Atlas_Id 61798
Location 22q13.33  [Link to chromosome band 22q13]
Location_base_pair Starts at 51021455 and ends at 51022360 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CHKB-AS1   40146
Cards
Entrez_Gene (NCBI)CHKB-AS1  100144603  CHKB antisense RNA 1 (head to head)
Aliases
GeneCards (Weizmann)CHKB-AS1
Ensembl hg19 (Hinxton)ENSG00000205559 [Gene_View]  chr22:51021455-51022360 [Contig_View]  CHKB-AS1 [Vega]
Ensembl hg38 (Hinxton)ENSG00000205559 [Gene_View]  chr22:51021455-51022360 [Contig_View]  CHKB-AS1 [Vega]
ICGC DataPortalENSG00000205559
TCGA cBioPortalCHKB-AS1
AceView (NCBI)CHKB-AS1
Genatlas (Paris)CHKB-AS1
WikiGenes100144603
SOURCE (Princeton)CHKB-AS1
Genetics Home Reference (NIH)CHKB-AS1
Genomic and cartography
GoldenPath hg19 (UCSC)CHKB-AS1  -     chr22:51021455-51022360 +  22q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CHKB-AS1  -     22q13.33   [Description]    (hg38-Dec_2013)
EnsemblCHKB-AS1 - 22q13.33 [CytoView hg19]  CHKB-AS1 - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBICHKB-AS1 [Mapview hg19]  CHKB-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BE393070 BI561134 BJ989458 CR456603 CR980518
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NT_011526 NW_004929431
Consensus coding sequences : CCDS (NCBI)CHKB-AS1
Cluster EST : UnigeneHs.657275 [ NCBI ]
CGAP (NCI)Hs.657275
Alternative Splicing GalleryENSG00000205559
Gene ExpressionCHKB-AS1 [ NCBI-GEO ]   CHKB-AS1 [ EBI - ARRAY_EXPRESS ]   CHKB-AS1 [ SEEK ]   CHKB-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CHKB-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100144603
GTEX Portal (Tissue expression)CHKB-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CHKB-AS1
DMDM Disease mutations100144603
Blocks (Seattle)CHKB-AS1
Human Protein AtlasENSG00000205559
IPIIPI00447459   
Protein Interaction databases
FunCoupENSG00000205559
BioGRIDCHKB-AS1
STRING (EMBL)CHKB-AS1
ZODIACCHKB-AS1
Ontologies - Pathways
Huge Navigator CHKB-AS1 [HugePedia]
snp3D : Map Gene to Disease100144603
BioCentury BCIQCHKB-AS1
ClinGenCHKB-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100144603
Clinical trialCHKB-AS1
Miscellaneous
canSAR (ICR)CHKB-AS1 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCHKB-AS1
EVEXCHKB-AS1
GoPubMedCHKB-AS1
iHOPCHKB-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:25 CET 2017

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