Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CHKB-CPT1B (CHKB-CPT1B readthrough (NMD candidate))

Identity

Other aliasCHKL-CPT1B
HGNC (Hugo) CHKB-CPT1B
LocusID (NCBI) 386593
Atlas_Id 61799
Location 22q13.33  [Link to chromosome band 22q13]
Location_base_pair Starts at 51007290 and ends at 51021428 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CHKB-CPT1B   41998
Cards
Entrez_Gene (NCBI)CHKB-CPT1B  386593  CHKB-CPT1B readthrough (NMD candidate)
AliasesCHKL-CPT1B
GeneCards (Weizmann)CHKB-CPT1B
Ensembl hg19 (Hinxton)ENSG00000254413 [Gene_View]  chr22:51007290-51021428 [Contig_View]  CHKB-CPT1B [Vega]
Ensembl hg38 (Hinxton)ENSG00000254413 [Gene_View]  chr22:51007290-51021428 [Contig_View]  CHKB-CPT1B [Vega]
ICGC DataPortalENSG00000254413
TCGA cBioPortalCHKB-CPT1B
AceView (NCBI)CHKB-CPT1B
Genatlas (Paris)CHKB-CPT1B
WikiGenes386593
SOURCE (Princeton)CHKB-CPT1B
Genetics Home Reference (NIH)CHKB-CPT1B
Genomic and cartography
GoldenPath hg19 (UCSC)CHKB-CPT1B  -     chr22:51007290-51021428 -  22q13.33   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)CHKB-CPT1B  -     22q13.33   [Description]    (hg38-Dec_2013)
EnsemblCHKB-CPT1B - 22q13.33 [CytoView hg19]  CHKB-CPT1B - 22q13.33 [CytoView hg38]
Mapping of homologs : NCBICHKB-CPT1B [Mapview hg19]  CHKB-CPT1B [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB051457 AK301477 BC131570 CA312186
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000022 NC_018933 NG_003100 NG_012643 NT_011526 NW_004929431
Consensus coding sequences : CCDS (NCBI)CHKB-CPT1B
Cluster EST : UnigeneHs.439777 [ NCBI ]
CGAP (NCI)Hs.439777
Alternative Splicing GalleryENSG00000254413
Gene ExpressionCHKB-CPT1B [ NCBI-GEO ]   CHKB-CPT1B [ EBI - ARRAY_EXPRESS ]   CHKB-CPT1B [ SEEK ]   CHKB-CPT1B [ MEM ]
Gene Expression Viewer (FireBrowse)CHKB-CPT1B [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)386593
GTEX Portal (Tissue expression)CHKB-CPT1B
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CHKB-CPT1B
DMDM Disease mutations386593
Blocks (Seattle)CHKB-CPT1B
Human Protein AtlasENSG00000254413
Protein Interaction databases
FunCoupENSG00000254413
BioGRIDCHKB-CPT1B
STRING (EMBL)CHKB-CPT1B
ZODIACCHKB-CPT1B
Ontologies - Pathways
Huge Navigator CHKB-CPT1B [HugePedia]
snp3D : Map Gene to Disease386593
BioCentury BCIQCHKB-CPT1B
ClinGenCHKB-CPT1B
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD386593
Clinical trialCHKB-CPT1B
Miscellaneous
canSAR (ICR)CHKB-CPT1B (select the gene name)
Probes
Litterature
PubMed7 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCHKB-CPT1B
EVEXCHKB-CPT1B
GoPubMedCHKB-CPT1B
iHOPCHKB-CPT1B
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 11:59:25 CET 2017

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