Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CHN2 (chimerin 2)

Identity

Alias (NCBI)ARHGAP3
BCH
CHN2-3
RHOGAP3
HGNC (Hugo) CHN2
HGNC Alias symbARHGAP3
RhoGAP3
HGNC Alias namebeta chimerin
 chimaerin 2
HGNC Previous namechimerin (chimaerin) 2
LocusID (NCBI) 1124
Atlas_Id 43212
Location 7p14.3  [Link to chromosome band 7p14]
Location_base_pair Starts at 29194775 and ends at 29514328 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ANK3 (10q21.2)::CHN2 (7p14.3)CHN2 (7p14.3)::INSR (19p13.2)CPSF7 (11q12.2)::CHN2 (7p14.3)
WHSC1 (4p16.3)::CHN2 (7p14.3)ANK3 10q21.2::CHN2 7p14.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



Other Leukemias implicated (Data extracted from papers in the Atlas) [ 1 ]
  i(7)(q10)


External links

Nomenclature
HGNC (Hugo)CHN2   1944
Cards
Entrez_Gene (NCBI)CHN2    chimerin 2
AliasesARHGAP3; BCH; CHN2-3; RHOGAP3
GeneCards (Weizmann)CHN2
Ensembl hg19 (Hinxton)ENSG00000106069 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000106069 [Gene_View]  ENSG00000106069 [Sequence]  chr7:29194775-29514328 [Contig_View]  CHN2 [Vega]
ICGC DataPortalENSG00000106069
TCGA cBioPortalCHN2
AceView (NCBI)CHN2
Genatlas (Paris)CHN2
SOURCE (Princeton)CHN2
Genetics Home Reference (NIH)CHN2
Genomic and cartography
GoldenPath hg38 (UCSC)CHN2  -     chr7:29194775-29514328 +  7p14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CHN2  -     7p14.3   [Description]    (hg19-Feb_2009)
GoldenPathCHN2 - 7p14.3 [CytoView hg19]  CHN2 - 7p14.3 [CytoView hg38]
ImmunoBaseENSG00000106069
Genome Data Viewer NCBICHN2 [Mapview hg19]  
OMIM602857   
Gene and transcription
Genbank (Entrez)AA521339 AK026415 AK124021 AK126784 AK293959
RefSeq transcript (Entrez)NM_001039936 NM_001293069 NM_001293070 NM_001293071 NM_001293072 NM_001293073 NM_001293075 NM_001293076 NM_001293077 NM_001293078 NM_001293079 NM_001293080 NM_001293081 NM_001398427 NM_004067
Consensus coding sequences : CCDS (NCBI)CHN2
Gene ExpressionCHN2 [ NCBI-GEO ]   CHN2 [ EBI - ARRAY_EXPRESS ]   CHN2 [ SEEK ]   CHN2 [ MEM ]
Gene Expression Viewer (FireBrowse)CHN2 [ Firebrowse - Broad ]
GenevisibleExpression of CHN2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)1124
GTEX Portal (Tissue expression)CHN2
Human Protein AtlasENSG00000106069-CHN2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CHN2
Human Protein Atlas [tissue]ENSG00000106069-CHN2 [tissue]
HPRD04173
Protein Interaction databases
BioGRIDCHN2
STRING (EMBL)CHN2
ZODIACCHN2
Ontologies - Pathways
Litterature
PubMed55 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCHN2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Thu Jan 20 12:27:29 CET 2022

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