Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CHRD (chordin)

Identity

Alias (NCBI)-
HGNC (Hugo) CHRD
LocusID (NCBI) 8646
Atlas_Id 43607
Location 3q27.1  [Link to chromosome band 3q27]
Location_base_pair Starts at 184380073 and ends at 184389835 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
PQLC2L (3q25.32) / CHRD (3q27.1)C3orf55 CHRD 3q27.1

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CHRD   1949
Cards
Entrez_Gene (NCBI)CHRD    chordin
Aliases
GeneCards (Weizmann)CHRD
Ensembl hg19 (Hinxton)ENSG00000090539 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000090539 [Gene_View]  ENSG00000090539 [Sequence]  chr3:184380073-184389835 [Contig_View]  CHRD [Vega]
ICGC DataPortalENSG00000090539
TCGA cBioPortalCHRD
AceView (NCBI)CHRD
Genatlas (Paris)CHRD
SOURCE (Princeton)CHRD
Genetics Home Reference (NIH)CHRD
Genomic and cartography
GoldenPath hg38 (UCSC)CHRD  -     chr3:184380073-184389835 +  3q27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CHRD  -     3q27.1   [Description]    (hg19-Feb_2009)
GoldenPathCHRD - 3q27.1 [CytoView hg19]  CHRD - 3q27.1 [CytoView hg38]
ImmunoBaseENSG00000090539
Genome Data Viewer NCBICHRD [Mapview hg19]  
OMIM603475   
Gene and transcription
Genbank (Entrez)AB208947 AF038198 AF076612 AF209928 AF209929
RefSeq transcript (Entrez)NM_001304472 NM_001304473 NM_001304474 NM_003741 NM_177978 NM_177979
Consensus coding sequences : CCDS (NCBI)CHRD
Gene ExpressionCHRD [ NCBI-GEO ]   CHRD [ EBI - ARRAY_EXPRESS ]   CHRD [ SEEK ]   CHRD [ MEM ]
Gene Expression Viewer (FireBrowse)CHRD [ Firebrowse - Broad ]
GenevisibleExpression of CHRD in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)8646
GTEX Portal (Tissue expression)CHRD
Human Protein AtlasENSG00000090539-CHRD [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CHRD
Human Protein Atlas [tissue]ENSG00000090539-CHRD [tissue]
HPRD04592
Protein Interaction databases
BioGRIDCHRD
STRING (EMBL)CHRD
ZODIACCHRD
Ontologies - Pathways
Litterature
PubMed36 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCHRD
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 15:03:56 CEST 2021

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.