Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CHRM3-AS1 (CHRM3 antisense RNA 1)

Identity

Alias_namesCHRM3 antisense RNA 1 (non-protein coding)
Other alias-
HGNC (Hugo) CHRM3-AS1
LocusID (NCBI) 100873984
Atlas_Id 61810
Location 1q43  [Link to chromosome band 1q43]
Location_base_pair Starts at 239898019 and ends at 239899872 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CHRM3-AS1   40150
Cards
Entrez_Gene (NCBI)CHRM3-AS1  100873984  CHRM3 antisense RNA 1
Aliases
GeneCards (Weizmann)CHRM3-AS1
Ensembl hg19 (Hinxton)ENSG00000234601 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000234601 [Gene_View]  chr1:239898019-239899872 [Contig_View]  CHRM3-AS1 [Vega]
ICGC DataPortalENSG00000234601
TCGA cBioPortalCHRM3-AS1
AceView (NCBI)CHRM3-AS1
Genatlas (Paris)CHRM3-AS1
WikiGenes100873984
SOURCE (Princeton)CHRM3-AS1
Genetics Home Reference (NIH)CHRM3-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CHRM3-AS1  -     chr1:239898019-239899872 -  1q43   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CHRM3-AS1  -     1q43   [Description]    (hg19-Feb_2009)
EnsemblCHRM3-AS1 - 1q43 [CytoView hg19]  CHRM3-AS1 - 1q43 [CytoView hg38]
Mapping of homologs : NCBICHRM3-AS1 [Mapview hg19]  CHRM3-AS1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX116264
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CHRM3-AS1
Cluster EST : UnigeneHs.199475 [ NCBI ]
CGAP (NCI)Hs.199475
Alternative Splicing GalleryENSG00000234601
Gene ExpressionCHRM3-AS1 [ NCBI-GEO ]   CHRM3-AS1 [ EBI - ARRAY_EXPRESS ]   CHRM3-AS1 [ SEEK ]   CHRM3-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CHRM3-AS1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)100873984
GTEX Portal (Tissue expression)CHRM3-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CHRM3-AS1
DMDM Disease mutations100873984
Blocks (Seattle)CHRM3-AS1
Human Protein AtlasENSG00000234601
Protein Interaction databases
FunCoupENSG00000234601
BioGRIDCHRM3-AS1
STRING (EMBL)CHRM3-AS1
ZODIACCHRM3-AS1
Ontologies - Pathways
Huge Navigator CHRM3-AS1 [HugePedia]
snp3D : Map Gene to Disease100873984
BioCentury BCIQCHRM3-AS1
ClinGenCHRM3-AS1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD100873984
Clinical trialCHRM3-AS1
Miscellaneous
canSAR (ICR)CHRM3-AS1 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCHRM3-AS1
EVEXCHRM3-AS1
GoPubMedCHRM3-AS1
iHOPCHRM3-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:04:48 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.