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CHRNG (cholinergic receptor, nicotinic, gamma (muscle))

Identity

Other namesACHRG
HGNC (Hugo) CHRNG
LocusID (NCBI) 1146
Location 2q37.1
Location_base_pair Starts at 233404437 and ends at 233411038 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)CHRNG   1967
Entrez_Gene (NCBI)CHRNG  1146  cholinergic receptor, nicotinic, gamma (muscle)
Cards
GeneCards (Weizmann)CHRNG
Ensembl (Hinxton)ENSG00000196811 [Gene_View]  chr2:233404437-233411038 [Contig_View]  CHRNG [Vega]
AceView (NCBI)CHRNG
Genatlas (Paris)CHRNG
SOURCE (Stanford)NM_005199
Genomic and cartography
GoldenPath (UCSC)CHRNG  -  2q37.1   chr2:233404437-233411038 +  2q37.1   [Description]    (hg19-Feb_2009)
EnsemblCHRNG - 2q37.1 [CytoView]
Mapping of homologs : NCBICHRNG [Mapview]
OMIM100730   253290   265000   
Gene and transcription
Genbank (Entrez)AK125362 AK309340 BC111802
RefSeq transcript (SRS)NM_005199
RefSeq transcript (Entrez)NM_005199
RefSeq genomic (SRS)AC_000134 NC_000002 NC_018913 NG_012954 NT_005403 NW_001838867 NW_004078008
RefSeq genomic (Entrez)AC_000134 NC_000002 NC_018913 NG_012954 NT_005403 NW_001838867 NW_004078008
Consensus coding sequences : CCDS (NCBI)CHRNG
Cluster EST : UnigeneHs.248101 [ SRS ] Hs.248101 [ NCBI ]
CGAP (NCI)Hs.248101
Alternative Splicing : Fast-db (Paris)GSHG0017280
Alternative Splicing GalleryENSG00000196811
Gene ExpressionCHRNG [ NCBI-GEO ]   CHRNG [ EBI - ARRAY_EXPRESS ]
Protein : pattern, domain, 3D structure
UniProt/SwissProtP07510 (SRS) P07510 (Uniprot)
NextProtP07510
With graphics : InterProP07510
Splice isoforms : SwissVarP07510(Swissvar)
Domaine pattern : Prosite (SRS)NEUROTR_ION_CHANNEL (PS00236)   
Domaine pattern : Prosite (Expaxy)NEUROTR_ION_CHANNEL (PS00236)   
Domains : Interpro (SRS)Neur_chan_lig-bd    Neur_channel    Neurotrans-gated_channel_TM    Neurotransmitter_ion_chnl_CS    Nicotinic_acetylcholine_rcpt   
Domains : Interpro (EBI)Neur_chan_lig-bd    Neur_channel    Neurotrans-gated_channel_TM    Neurotransmitter_ion_chnl_CS    Nicotinic_acetylcholine_rcpt   
Related proteins : CluSTrP07510
Domain families : Pfam (SRS)Neur_chan_LBD (PF02931)    Neur_chan_memb (PF02932)   
Domain families : Pfam (Sanger)Neur_chan_LBD (PF02931)    Neur_chan_memb (PF02932)   
Domain families : Pfam (NCBI)pfam02931    pfam02932   
DMDM1146
Blocks (Seattle)P07510
Human Protein AtlasENSG00000196811
HPRD00009
IPIIPI00746413   IPI00782932   
Protein Interaction databases
DIP (DOE-UCLA)P07510
IntAct (EBI)P07510
FunCoupENSG00000196811
REACTOMECHRNG
Protein Interaction Database1146
BioGRIDCHRNG
InParanoidP07510
Interologous Interaction database P07510
IntegromeDBCHRNG
Polymorphism : SNP, mutations, diseases
SNP Single Nucleotide Polymorphism (NCBI)CHRNG
SNP (GeneSNP Utah)CHRNG
SNP : HGBaseCHRNG
Genetic variants : HAPMAPCHRNG
Somatic Mutations in Cancer : COSMICCHRNG 
CONAN: Copy Number AnalysisCHRNG 
Mutations and Diseases : HGMDCHRNG
OMIM100730    253290    265000   
GENETests100730    253290    265000   
Disease Genetic AssociationCHRNG
Huge Navigator CHRNG [HugePedia]  CHRNG [HugeCancerGEM]
Genomic VariantsCHRNG  CHRNG [DGVbeta]
snp3D : Map Gene to Disease1146
General knowledge
Homologs : HomoloGeneCHRNG
Homology/Alignments : Family Browser (UCSC)CHRNG
Phylogenetic Trees/Animal Genes : TreeFamCHRNG
Chemical/Protein Interactions : CTD1146
Chemical/Pharm GKB GenePA26499
Clinical trialCHRNG
Cancer Resource (Charite)ENSG00000196811
Ontology : AmiGOacetylcholine-activated cation-selective channel activity  plasma membrane  integral to plasma membrane  acetylcholine-gated channel complex  transport  muscle contraction  signal transduction  synaptic transmission  channel activity  acetylcholine receptor activity  cell junction  regulation of membrane potential  postsynaptic membrane  
Ontology : EGO-EBIacetylcholine-activated cation-selective channel activity  plasma membrane  integral to plasma membrane  acetylcholine-gated channel complex  transport  muscle contraction  signal transduction  synaptic transmission  channel activity  acetylcholine receptor activity  cell junction  regulation of membrane potential  postsynaptic membrane  
Pathways : BIOCARTARole of nicotinic acetylcholine receptors in the regulation of apoptosis [Genes]   
Other databases
Probes
Litterature
PubMed21 Pubmed reference(s) in Entrez
PubGeneCHRNG
iHOPCHRNG
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written09-2002Dessen P, Le Minor S
Updated01-2013Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 1 12:39:43 CEST 2013
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