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CIB3 (calcium and integrin binding family member 3)

Identity

Alias_symbol (synonym)KIP3
Other alias
HGNC (Hugo) CIB3
LocusID (NCBI) 117286
Atlas_Id 47078
Location 19p13.11  [Link to chromosome band 19p13]
Location_base_pair Starts at 16161368 and ends at 16173525 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CIB3   24580
Cards
Entrez_Gene (NCBI)CIB3  117286  calcium and integrin binding family member 3
AliasesKIP3
GeneCards (Weizmann)CIB3
Ensembl hg19 (Hinxton)ENSG00000141977 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000141977 [Gene_View]  chr19:16161368-16173525 [Contig_View]  CIB3 [Vega]
ICGC DataPortalENSG00000141977
TCGA cBioPortalCIB3
AceView (NCBI)CIB3
Genatlas (Paris)CIB3
WikiGenes117286
SOURCE (Princeton)CIB3
Genetics Home Reference (NIH)CIB3
Genomic and cartography
GoldenPath hg38 (UCSC)CIB3  -     chr19:16161368-16173525 -  19p13.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CIB3  -     19p13.11   [Description]    (hg19-Feb_2009)
EnsemblCIB3 - 19p13.11 [CytoView hg19]  CIB3 - 19p13.11 [CytoView hg38]
Mapping of homologs : NCBICIB3 [Mapview hg19]  CIB3 [Mapview hg38]
OMIM610645   
Gene and transcription
Genbank (Entrez)AB050868 AW295492 BC069320 BC069428 BC069524
RefSeq transcript (Entrez)NM_001300922 NM_054113
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CIB3
Cluster EST : UnigeneHs.255432 [ NCBI ]
CGAP (NCI)Hs.255432
Alternative Splicing GalleryENSG00000141977
Gene ExpressionCIB3 [ NCBI-GEO ]   CIB3 [ EBI - ARRAY_EXPRESS ]   CIB3 [ SEEK ]   CIB3 [ MEM ]
Gene Expression Viewer (FireBrowse)CIB3 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)117286
GTEX Portal (Tissue expression)CIB3
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96Q77   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96Q77  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96Q77
Splice isoforms : SwissVarQ96Q77
PhosPhoSitePlusQ96Q77
Domaine pattern : Prosite (Expaxy)EF_HAND_1 (PS00018)    EF_HAND_2 (PS50222)   
Domains : Interpro (EBI)EF-hand-dom_pair    EF_Hand_1_Ca_BS    EF_hand_dom   
Domain families : Pfam (Sanger)EF-hand_7 (PF13499)   
Domain families : Pfam (NCBI)pfam13499   
Conserved Domain (NCBI)CIB3
DMDM Disease mutations117286
Blocks (Seattle)CIB3
SuperfamilyQ96Q77
Human Protein AtlasENSG00000141977
Peptide AtlasQ96Q77
HPRD16713
IPIIPI00044729   IPI00451589   IPI00431766   IPI01014971   
Protein Interaction databases
DIP (DOE-UCLA)Q96Q77
IntAct (EBI)Q96Q77
FunCoupENSG00000141977
BioGRIDCIB3
STRING (EMBL)CIB3
ZODIACCIB3
Ontologies - Pathways
QuickGOQ96Q77
Ontology : AmiGOmagnesium ion binding  calcium ion binding  protein binding  
Ontology : EGO-EBImagnesium ion binding  calcium ion binding  protein binding  
NDEx NetworkCIB3
Atlas of Cancer Signalling NetworkCIB3
Wikipedia pathwaysCIB3
Orthology - Evolution
OrthoDB117286
GeneTree (enSembl)ENSG00000141977
Phylogenetic Trees/Animal Genes : TreeFamCIB3
HOVERGENQ96Q77
HOGENOMQ96Q77
Homologs : HomoloGeneCIB3
Homology/Alignments : Family Browser (UCSC)CIB3
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCIB3 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CIB3
dbVarCIB3
ClinVarCIB3
1000_GenomesCIB3 
Exome Variant ServerCIB3
ExAC (Exome Aggregation Consortium)CIB3 (select the gene name)
Genetic variants : HAPMAP117286
Genomic Variants (DGV)CIB3 [DGVbeta]
DECIPHERCIB3 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCIB3 
Mutations
ICGC Data PortalCIB3 
TCGA Data PortalCIB3 
Broad Tumor PortalCIB3
OASIS PortalCIB3 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCIB3  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCIB3
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CIB3
DgiDB (Drug Gene Interaction Database)CIB3
DoCM (Curated mutations)CIB3 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CIB3 (select a term)
intoGenCIB3
Cancer3DCIB3(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610645   
Orphanet
MedgenCIB3
Genetic Testing Registry CIB3
NextProtQ96Q77 [Medical]
TSGene117286
GENETestsCIB3
Target ValidationCIB3
Huge Navigator CIB3 [HugePedia]
snp3D : Map Gene to Disease117286
BioCentury BCIQCIB3
ClinGenCIB3
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD117286
Chemical/Pharm GKB GenePA134867741
Clinical trialCIB3
Miscellaneous
canSAR (ICR)CIB3 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCIB3
EVEXCIB3
GoPubMedCIB3
iHOPCIB3
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:28:29 CEST 2017

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