Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CINP (cyclin dependent kinase 2 interacting protein)

Identity

Alias_symbol (synonym)MGC849
Other alias-
HGNC (Hugo) CINP
LocusID (NCBI) 51550
Atlas_Id 51274
Location 14q32.31  [Link to chromosome band 14q32]
Location_base_pair Starts at 102348282 and ends at 102362916 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
LINC00914 () / CINP (14q32.31)RAGE CINP 14q32.31

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CINP   23789
Cards
Entrez_Gene (NCBI)CINP  51550  cyclin dependent kinase 2 interacting protein
Aliases
GeneCards (Weizmann)CINP
Ensembl hg19 (Hinxton)ENSG00000100865 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000100865 [Gene_View]  chr14:102348282-102362916 [Contig_View]  CINP [Vega]
ICGC DataPortalENSG00000100865
TCGA cBioPortalCINP
AceView (NCBI)CINP
Genatlas (Paris)CINP
WikiGenes51550
SOURCE (Princeton)CINP
Genetics Home Reference (NIH)CINP
Genomic and cartography
GoldenPath hg38 (UCSC)CINP  -     chr14:102348282-102362916 -  14q32.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CINP  -     14q32.31   [Description]    (hg19-Feb_2009)
EnsemblCINP - 14q32.31 [CytoView hg19]  CINP - 14q32.31 [CytoView hg38]
Mapping of homologs : NCBICINP [Mapview hg19]  CINP [Mapview hg38]
OMIM613362   
Gene and transcription
Genbank (Entrez)AF228148 AF228149 AK056112 BC000600 BU174070
RefSeq transcript (Entrez)NM_001177611 NM_001177612 NM_001320046 NM_032630
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CINP
Cluster EST : UnigeneHs.129634 [ NCBI ]
CGAP (NCI)Hs.129634
Alternative Splicing GalleryENSG00000100865
Gene ExpressionCINP [ NCBI-GEO ]   CINP [ EBI - ARRAY_EXPRESS ]   CINP [ SEEK ]   CINP [ MEM ]
Gene Expression Viewer (FireBrowse)CINP [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)51550
GTEX Portal (Tissue expression)CINP
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9BW66   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9BW66  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9BW66
Splice isoforms : SwissVarQ9BW66
PhosPhoSitePlusQ9BW66
Domains : Interpro (EBI)Cyclin-dep_Kinase_2_interact   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CINP
DMDM Disease mutations51550
Blocks (Seattle)CINP
SuperfamilyQ9BW66
Human Protein AtlasENSG00000100865
Peptide AtlasQ9BW66
HPRD16715
IPIIPI00013263   IPI00964215   IPI00963950   
Protein Interaction databases
DIP (DOE-UCLA)Q9BW66
IntAct (EBI)Q9BW66
FunCoupENSG00000100865
BioGRIDCINP
STRING (EMBL)CINP
ZODIACCINP
Ontologies - Pathways
QuickGOQ9BW66
Ontology : AmiGOprotein binding  nucleus  DNA replication  DNA repair  cell cycle  cell division  
Ontology : EGO-EBIprotein binding  nucleus  DNA replication  DNA repair  cell cycle  cell division  
NDEx NetworkCINP
Atlas of Cancer Signalling NetworkCINP
Wikipedia pathwaysCINP
Orthology - Evolution
OrthoDB51550
GeneTree (enSembl)ENSG00000100865
Phylogenetic Trees/Animal Genes : TreeFamCINP
HOVERGENQ9BW66
HOGENOMQ9BW66
Homologs : HomoloGeneCINP
Homology/Alignments : Family Browser (UCSC)CINP
Gene fusions - Rearrangements
Fusion: TCGARAGE CINP 14q32.31 LUAD
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCINP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CINP
dbVarCINP
ClinVarCINP
1000_GenomesCINP 
Exome Variant ServerCINP
ExAC (Exome Aggregation Consortium)CINP (select the gene name)
Genetic variants : HAPMAP51550
Genomic Variants (DGV)CINP [DGVbeta]
DECIPHERCINP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCINP 
Mutations
ICGC Data PortalCINP 
TCGA Data PortalCINP 
Broad Tumor PortalCINP
OASIS PortalCINP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCINP  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCINP
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CINP
DgiDB (Drug Gene Interaction Database)CINP
DoCM (Curated mutations)CINP (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CINP (select a term)
intoGenCINP
Cancer3DCINP(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613362   
Orphanet
MedgenCINP
Genetic Testing Registry CINP
NextProtQ9BW66 [Medical]
TSGene51550
GENETestsCINP
Huge Navigator CINP [HugePedia]
snp3D : Map Gene to Disease51550
BioCentury BCIQCINP
ClinGenCINP
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD51550
Chemical/Pharm GKB GenePA165478684
Clinical trialCINP
Miscellaneous
canSAR (ICR)CINP (select the gene name)
Probes
Litterature
PubMed17 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCINP
EVEXCINP
GoPubMedCINP
iHOPCINP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Fri May 19 12:10:42 CEST 2017

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