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CISTR (chondrogenesis-associated transcript)

Identity

Alias_symbol (synonym)CISTR-ACT
CISTRACT
re52431
Other alias
HGNC (Hugo) CISTR
LocusID (NCBI) 102216268
Atlas_Id 61840
Location 12q13.13  [Link to chromosome band 12q13]
Location_base_pair Starts at 53750447 and ends at 53757034 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CISTR   49426
Cards
Entrez_Gene (NCBI)CISTR  102216268  chondrogenesis-associated transcript
AliasesCISTR-ACT; CISTRACT; re52431
GeneCards (Weizmann)CISTR
Ensembl hg19 (Hinxton)ENSG00000260492 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000260492 [Gene_View]  chr12:53750447-53757034 [Contig_View]  CISTR [Vega]
ICGC DataPortalENSG00000260492
TCGA cBioPortalCISTR
AceView (NCBI)CISTR
Genatlas (Paris)CISTR
WikiGenes102216268
SOURCE (Princeton)CISTR
Genetics Home Reference (NIH)CISTR
Genomic and cartography
GoldenPath hg38 (UCSC)CISTR  -     chr12:53750447-53757034 -  12q13.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CISTR  -     12q13.13   [Description]    (hg19-Feb_2009)
EnsemblCISTR - 12q13.13 [CytoView hg19]  CISTR - 12q13.13 [CytoView hg38]
Mapping of homologs : NCBICISTR [Mapview hg19]  CISTR [Mapview hg38]
Gene and transcription
Genbank (Entrez)DA125942 HY042141
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CISTR
Cluster EST : UnigeneHs.742074 [ NCBI ]
CGAP (NCI)Hs.742074
Alternative Splicing GalleryENSG00000260492
Gene ExpressionCISTR [ NCBI-GEO ]   CISTR [ EBI - ARRAY_EXPRESS ]   CISTR [ SEEK ]   CISTR [ MEM ]
Gene Expression Viewer (FireBrowse)CISTR [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)102216268
GTEX Portal (Tissue expression)CISTR
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CISTR
DMDM Disease mutations102216268
Blocks (Seattle)CISTR
Human Protein AtlasENSG00000260492
Protein Interaction databases
FunCoupENSG00000260492
BioGRIDCISTR
STRING (EMBL)CISTR
ZODIACCISTR
Ontologies - Pathways
Huge Navigator CISTR [HugePedia]
snp3D : Map Gene to Disease102216268
BioCentury BCIQCISTR
ClinGenCISTR
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD102216268
Clinical trialCISTR
Miscellaneous
canSAR (ICR)CISTR (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCISTR
EVEXCISTR
GoPubMedCISTR
iHOPCISTR
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed Jun 7 15:43:43 CEST 2017

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