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CKAP2 (cytoskeleton associated protein 2)

Identity

Alias (NCBI)LB1
TMAP
se20-10
HGNC (Hugo) CKAP2
HGNC Alias symbLB1
FLJ10749
se20-10
TMAP
HGNC Alias nametumor-associated microtubule-associated protein
LocusID (NCBI) 26586
Atlas_Id 53897
Location 13q14.3  [Link to chromosome band 13q14]
Location_base_pair Starts at 52455478 and ends at 52476627 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
UBL3 (13q12.3) / CKAP2 (13q14.3)UBL3 13q12.3 / CKAP2 13q14.3

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CKAP2   1990
Cards
Entrez_Gene (NCBI)CKAP2    cytoskeleton associated protein 2
AliasesLB1; TMAP; se20-10
GeneCards (Weizmann)CKAP2
Ensembl hg19 (Hinxton)ENSG00000136108 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000136108 [Gene_View]  ENSG00000136108 [Sequence]  chr13:52455478-52476627 [Contig_View]  CKAP2 [Vega]
ICGC DataPortalENSG00000136108
TCGA cBioPortalCKAP2
AceView (NCBI)CKAP2
Genatlas (Paris)CKAP2
SOURCE (Princeton)CKAP2
Genetics Home Reference (NIH)CKAP2
Genomic and cartography
GoldenPath hg38 (UCSC)CKAP2  -     chr13:52455478-52476627 +  13q14.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CKAP2  -     13q14.3   [Description]    (hg19-Feb_2009)
GoldenPathCKAP2 - 13q14.3 [CytoView hg19]  CKAP2 - 13q14.3 [CytoView hg38]
ImmunoBaseENSG00000136108
genome Data Viewer NCBICKAP2 [Mapview hg19]  
OMIM611569   
Gene and transcription
Genbank (Entrez)AA308726 AF177227 AI499799 AK001611 AK022982
RefSeq transcript (Entrez)NM_001098525 NM_001286686 NM_001286687 NM_018204
Consensus coding sequences : CCDS (NCBI)CKAP2
Alternative Splicing GalleryENSG00000136108
Gene ExpressionCKAP2 [ NCBI-GEO ]   CKAP2 [ EBI - ARRAY_EXPRESS ]   CKAP2 [ SEEK ]   CKAP2 [ MEM ]
Gene Expression Viewer (FireBrowse)CKAP2 [ Firebrowse - Broad ]
GenevisibleExpression of CKAP2 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)26586
GTEX Portal (Tissue expression)CKAP2
Human Protein AtlasENSG00000136108-CKAP2 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CKAP2
Human Protein Atlas [tissue]ENSG00000136108-CKAP2 [tissue]
HPRD10832
Protein Interaction databases
BioGRIDCKAP2
STRING (EMBL)CKAP2
ZODIACCKAP2
Ontologies - Pathways
Litterature
PubMed64 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCKAP2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Wed Sep 15 22:08:23 CEST 2021

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