CLCN4 (chloride channel 4)

Identity

Other names	CLC4
	ClC-4
	ClC-4A
	MGC163150
HGNC	CLCN4
Location	Xp22.3
Note	Non-annotated gene. Preliminary data : if you are an author who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

External links

	Nomenclature
HGNC	CLCN4   2022
Entrez_Gene	CLCN4  1183  chloride channel 4
	Cards
GeneCards	CLCN4
Ensembl	CLCN4 [Search_View]   ENSG00000073464 [Gene_View]
Genatlas	CLCN4
GeneLynx	CLCN4
eGenome	CLCN4
euGene	1183
	Genomic and cartography
GoldenPath	CLCN4  -  Xp22.3   chrX:10084985-10165699 +  Xp22.2   [Description]    (hg18-March_2006)
Ensembl	CLCN4 - Xp22.2 [CytoView]
NCBI	Mapview
OMIM	Disease map [OMIM]
HomoloGene	CLCN4
	Gene and transcription
Genbank	AB019432 [ ENTREZ ]
Genbank	AF052117 [ ENTREZ ]
Genbank	AF170492 [ ENTREZ ]
Genbank	AK225287 [ ENTREZ ]
Genbank	AK289564 [ ENTREZ ]
RefSeq	NM_001830 [ SRS ]    NM_001830 [ ENTREZ ]
RefSeq	AC_000066 [ SRS ]    AC_000066 [ ENTREZ ]
RefSeq	AC_000155 [ SRS ]    AC_000155 [ ENTREZ ]
RefSeq	NC_000023 [ SRS ]    NC_000023 [ ENTREZ ]
RefSeq	NT_011757 [ SRS ]    NT_011757 [ ENTREZ ]
RefSeq	NW_001842360 [ SRS ]    NW_001842360 [ ENTREZ ]
RefSeq	NW_927700 [ SRS ]    NW_927700 [ ENTREZ ]
AceView	CLCN4 AceView - NCBI
Unigene	Hs.495674 [ SRS ]    Hs.495674 [ NCBI ]     HS495674 [ spliceNest ]
Fast-db	1596 (alternative variants)
	Protein : pattern, domain, 3D structure
SwissProt	P51793 [ SRS]    P51793 [ EXPASY ]     P51793 [ INTERPRO ]     P51793 [ UNIPROT ]
Prosite	PS51371 CBS [ SRS ]    PS51371 CBS [ Expasy ]
Interpro	IPR014743 Cl-channel_core [ SRS ]    IPR014743 Cl-channel_core [ EBI ]
Interpro	IPR001807 Cl-channel_volt [ SRS ]    IPR001807 Cl-channel_volt [ EBI ]
Interpro	IPR002246 Cl_channel4 [ SRS ]    IPR002246 Cl_channel4 [ EBI ]
Interpro	IPR000644 Cysta_beta_synth_core [ SRS ]    IPR000644 Cysta_beta_synth_core [ EBI ]
CluSTr	P51793
Pfam	PF00571 CBS [ SRS ]    PF00571 CBS [ Sanger ]    pfam00571 [ NCBI-CDD ]
Pfam	PF00654 Voltage_CLC [ SRS ]    PF00654 Voltage_CLC [ Sanger ]    pfam00654 [ NCBI-CDD ]
Smart	SM00116 CBS [EMBL]
Blocks	P51793
HPRD	02362
	Protein Interaction databases
DIP	P51793
IntAct	P51793
	Polymorphism : SNP, mutations, diseases
OMIM	302910    [ map ]
GENECLINICS	302910
SNP	CLCN4 [dbSNP-NCBI]
SNP	NM_001830 [SNP-NCI]
SNP	CLCN4 [GeneSNPs - Utah]  CLCN4] [HGBASE - SRS]
HAPMAP	CLCN4 [HAPMAP]
COSMIC	CLCN4 [Somatic mutation (COSMIC-CGP-Sanger)]
HGMD	CLCN4
	General knowledge
Family Browser	CLCN4 [UCSC Family Browser]
SOURCE	NM_001830
SMD	Hs.495674
SAGE	Hs.495674
GO	voltage-gated ion channel activity [Amigo]  voltage-gated ion channel activity
GO	voltage-gated chloride channel activity [Amigo]  voltage-gated chloride channel activity
GO	voltage-gated chloride channel activity [Amigo]  voltage-gated chloride channel activity
GO	ion transport [Amigo]  ion transport
GO	chloride transport [Amigo]  chloride transport
GO	chloride transport [Amigo]  chloride transport
GO	membrane [Amigo]  membrane
GO	integral to membrane [Amigo]  integral to membrane
GO	chloride ion binding [Amigo]  chloride ion binding
PubGene	CLCN4
TreeFam	CLCN4
CTD	1183 [Comparative ToxicoGenomics Database]
	Other databases
	Probes
Probe	CLCN4 Related clones (RZPD - Berlin)
	PubMed
PubMed	16 Pubmed reference(s) in Entrez

Genes in title	automatic search in PubMed
REVIEW articles	automatic search in PubMed
Last year publications	automatic search in PubMed

Search in all EBI   NCBI

Contributor(s)

Written	09-2002	Dessen P, Le Minor S
Updated	03-2008	Dessen P

© Atlas of Genetics and Cytogenetics in Oncology and Haematology

indexed on : Mon Sep 29 17:53:00 2008