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CLEC4GP1 (C-type lectin domain family 4 member G pseudogene 1)

Identity

Alias_namesC-type lectin domain family 4, member G pseudogene 1
Other alias-
HGNC (Hugo) CLEC4GP1
LocusID (NCBI) 440508
Atlas_Id 61878
Location 19p13.2  [Link to chromosome band 19p13]
Location_base_pair Starts at 7787484 and ends at 7791012 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CLEC4GP1   33502
Cards
Entrez_Gene (NCBI)CLEC4GP1  440508  C-type lectin domain family 4 member G pseudogene 1
Aliases
GeneCards (Weizmann)CLEC4GP1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:7787484-7791012 [Contig_View]  CLEC4GP1 [Vega]
TCGA cBioPortalCLEC4GP1
AceView (NCBI)CLEC4GP1
Genatlas (Paris)CLEC4GP1
WikiGenes440508
SOURCE (Princeton)CLEC4GP1
Genetics Home Reference (NIH)CLEC4GP1
Genomic and cartography
GoldenPath hg38 (UCSC)CLEC4GP1  -     chr19:7787484-7791012 +  19p13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CLEC4GP1  -     19p13.2   [Description]    (hg19-Feb_2009)
EnsemblCLEC4GP1 - 19p13.2 [CytoView hg19]  CLEC4GP1 - 19p13.2 [CytoView hg38]
Mapping of homologs : NCBICLEC4GP1 [Mapview hg19]  CLEC4GP1 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090689 AK090734 AK123140 BC047593
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CLEC4GP1
Cluster EST : UnigeneHs.568222 [ NCBI ]
CGAP (NCI)Hs.568222
Gene ExpressionCLEC4GP1 [ NCBI-GEO ]   CLEC4GP1 [ EBI - ARRAY_EXPRESS ]   CLEC4GP1 [ SEEK ]   CLEC4GP1 [ MEM ]
Gene Expression Viewer (FireBrowse)CLEC4GP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440508
GTEX Portal (Tissue expression)CLEC4GP1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CLEC4GP1
DMDM Disease mutations440508
Blocks (Seattle)CLEC4GP1
Protein Interaction databases
BioGRIDCLEC4GP1
STRING (EMBL)CLEC4GP1
ZODIACCLEC4GP1
Ontologies - Pathways
Huge Navigator CLEC4GP1 [HugePedia]
snp3D : Map Gene to Disease440508
BioCentury BCIQCLEC4GP1
ClinGenCLEC4GP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440508
Clinical trialCLEC4GP1
Miscellaneous
canSAR (ICR)CLEC4GP1 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCLEC4GP1
EVEXCLEC4GP1
GoPubMedCLEC4GP1
iHOPCLEC4GP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:42:48 CET 2017

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