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CLIP1-AS1 (CLIP1 antisense RNA 1)

Identity

Alias (NCBI)-
HGNC (Hugo) CLIP1-AS1
LocusID (NCBI) 100507066
Atlas_Id 61889
Location 12q24.31  [Link to chromosome band 12q24]
Location_base_pair Starts at 122395542 and ends at 122399944 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)CLIP1-AS1   48586
Cards
Entrez_Gene (NCBI)CLIP1-AS1    CLIP1 antisense RNA 1
Aliases
GeneCards (Weizmann)CLIP1-AS1
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr12:122395542-122399944 [Contig_View]  CLIP1-AS1 [Vega]
TCGA cBioPortalCLIP1-AS1
AceView (NCBI)CLIP1-AS1
Genatlas (Paris)CLIP1-AS1
SOURCE (Princeton)CLIP1-AS1
Genetics Home Reference (NIH)CLIP1-AS1
Genomic and cartography
GoldenPath hg38 (UCSC)CLIP1-AS1  -     chr12:122395542-122399944 +  12q24.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CLIP1-AS1  -     12q24.31   [Description]    (hg19-Feb_2009)
GoldenPathCLIP1-AS1 - 12q24.31 [CytoView hg19]  CLIP1-AS1 - 12q24.31 [CytoView hg38]
genome Data Viewer NCBICLIP1-AS1 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AI652996 BX097749 DB443977
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CLIP1-AS1
Gene ExpressionCLIP1-AS1 [ NCBI-GEO ]   CLIP1-AS1 [ EBI - ARRAY_EXPRESS ]   CLIP1-AS1 [ SEEK ]   CLIP1-AS1 [ MEM ]
Gene Expression Viewer (FireBrowse)CLIP1-AS1 [ Firebrowse - Broad ]
GenevisibleExpression of CLIP1-AS1 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)100507066
GTEX Portal (Tissue expression)CLIP1-AS1
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CLIP1-AS1
Blocks (Seattle)CLIP1-AS1
Protein Interaction databases
BioGRIDCLIP1-AS1
STRING (EMBL)CLIP1-AS1
ZODIACCLIP1-AS1
Ontologies - Pathways
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineCLIP1-AS1
EVEXCLIP1-AS1
GoPubMedCLIP1-AS1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sat Dec 5 16:50:09 CET 2020

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