CLN3 (CLN3 lysosomal/endosomal transmembrane protein, battenin)

2016-10-01  

Identity

HGNC
LOCATION
16p12.1
LOCUSID
ALIAS
BTN1,BTS,JNCL
FUSION GENES

Other Information

Locus ID:

NCBI: 1201
MIM: 607042
HGNC: 2074
Ensembl: ENSG00000261832

Variants:

dbSNP: 1201
ClinVar: 1201
TCGA: ENSG00000261832
COSMIC: CLN3

RNA/Proteins

Gene IDTranscript IDUniprot
ENSG00000261832ENST00000568224Q2TA70
ENSG00000261832ENST00000635887A0A024QZB8
ENSG00000261832ENST00000636017Q9UP10
ENSG00000261832ENST00000636503A0A1B0GW34
ENSG00000261832ENST00000636766A0A024QZB8
ENSG00000261832ENST00000636866A0A1B0GWD3
ENSG00000261832ENST00000637299A0A1B0GTS8
ENSG00000261832ENST00000637376A0A1B0GW34
ENSG00000261832ENST00000637378A0A1B0GW90
ENSG00000261832ENST00000637745A0A1B0GUX3
ENSG00000261832ENST00000638036A0A1B0GWH9

Pathways

PathwaySourceExternal ID
LysosomeKEGGko04142
LysosomeKEGGhsa04142

References

Pubmed IDYearTitleCitations
167142842006Autophagy is disrupted in a knock-in mouse model of juvenile neuronal ceroid lipofuscinosis.93
241546622014Next generation sequencing-based molecular diagnosis of retinitis pigmentosa: identification of a novel genotype-phenotype correlation and clinical refinements.88
154718872004Interconnections of CLN3, Hook1 and Rab proteins link Batten disease to defects in the endocytic pathway.55
242710132014Human iPSC models of neuronal ceroid lipofuscinosis capture distinct effects of TPP1 and CLN3 mutations on the endocytic pathway.40
156579022005CLN3, the protein associated with batten disease: structure, function and localization.39
146990762004Two motifs target Batten disease protein CLN3 to lysosomes in transfected nonneuronal and neuronal cells.35
146607992003A role in vacuolar arginine transport for yeast Btn1p and for human CLN3, the protein defective in Batten disease.33
188175252008Loss of the Batten disease gene CLN3 prevents exit from the TGN of the mannose 6-phosphate receptor.32
162511962005Defective lysosomal arginine transport in juvenile Batten disease.25
222617442012Neuronal ceroid lipofuscinosis protein CLN3 interacts with motor proteins and modifies location of late endosomal compartments.25

Citation

Dessen P

CLN3 (CLN3 lysosomal/endosomal transmembrane protein, battenin)

Atlas Genet Cytogenet Oncol Haematol. 2016-10-01

Online version: http://atlasgeneticsoncology.org/gene/56249/cln3