Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CLUH (clustered mitochondria homolog)

Identity

Alias_namesKIAA0664
KIAA0664
clustered mitochondria (cluA/CLU1) homolog
Alias_symbol (synonym)CLU1
Other alias
HGNC (Hugo) CLUH
LocusID (NCBI) 23277
Atlas_Id 61912
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 2689386 and ends at 2711633 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABR (17p13.3) / CLUH (17p13.3)CLUH (17p13.3) / DLG5 (10q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CLUH   29094
Cards
Entrez_Gene (NCBI)CLUH  23277  clustered mitochondria homolog
AliasesCLU1; KIAA0664
GeneCards (Weizmann)CLUH
Ensembl hg19 (Hinxton)ENSG00000132361 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132361 [Gene_View]  chr17:2689386-2711633 [Contig_View]  CLUH [Vega]
ICGC DataPortalENSG00000132361
TCGA cBioPortalCLUH
AceView (NCBI)CLUH
Genatlas (Paris)CLUH
WikiGenes23277
SOURCE (Princeton)CLUH
Genetics Home Reference (NIH)CLUH
Genomic and cartography
GoldenPath hg38 (UCSC)CLUH  -     chr17:2689386-2711633 -  17p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CLUH  -     17p13.3   [Description]    (hg19-Feb_2009)
EnsemblCLUH - 17p13.3 [CytoView hg19]  CLUH - 17p13.3 [CytoView hg38]
Mapping of homologs : NCBICLUH [Mapview hg19]  CLUH [Mapview hg38]
OMIM616184   
Gene and transcription
Genbank (Entrez)AB014564 AK023003 AK074252 AK093541 AK125717
RefSeq transcript (Entrez)NM_015229
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CLUH
Cluster EST : UnigeneHs.22616 [ NCBI ]
CGAP (NCI)Hs.22616
Alternative Splicing GalleryENSG00000132361
Gene ExpressionCLUH [ NCBI-GEO ]   CLUH [ EBI - ARRAY_EXPRESS ]   CLUH [ SEEK ]   CLUH [ MEM ]
Gene Expression Viewer (FireBrowse)CLUH [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevestigatorExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23277
GTEX Portal (Tissue expression)CLUH
Human Protein AtlasENSG00000132361-CLUH [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75153   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75153  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75153
Splice isoforms : SwissVarO75153
PhosPhoSitePlusO75153
Domaine pattern : Prosite (Expaxy)CLU (PS51823)   
Domains : Interpro (EBI)CLU    CLU-central    CLU_dom    CLU_N    GSKIP_dom    TPR-like_helical_dom   
Domain families : Pfam (Sanger)CLU (PF13236)    CLU_N (PF15044)    eIF3_p135 (PF12807)   
Domain families : Pfam (NCBI)pfam13236    pfam15044    pfam12807   
Conserved Domain (NCBI)CLUH
DMDM Disease mutations23277
Blocks (Seattle)CLUH
SuperfamilyO75153
Human Protein Atlas [tissue]ENSG00000132361-CLUH [tissue]
Peptide AtlasO75153
HPRD10014
IPIIPI00939707   IPI00024425   
Protein Interaction databases
DIP (DOE-UCLA)O75153
IntAct (EBI)O75153
FunCoupENSG00000132361
BioGRIDCLUH
STRING (EMBL)CLUH
ZODIACCLUH
Ontologies - Pathways
QuickGOO75153
Ontology : AmiGOmRNA binding  cytoplasm  mitochondrion organization  intracellular distribution of mitochondria  
Ontology : EGO-EBImRNA binding  cytoplasm  mitochondrion organization  intracellular distribution of mitochondria  
NDEx NetworkCLUH
Atlas of Cancer Signalling NetworkCLUH
Wikipedia pathwaysCLUH
Orthology - Evolution
OrthoDB23277
GeneTree (enSembl)ENSG00000132361
Phylogenetic Trees/Animal Genes : TreeFamCLUH
HOVERGENO75153
HOGENOMO75153
Homologs : HomoloGeneCLUH
Homology/Alignments : Family Browser (UCSC)CLUH
Gene fusions - Rearrangements
Fusion: Tumor Portal CLUH
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCLUH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CLUH
dbVarCLUH
ClinVarCLUH
1000_GenomesCLUH 
Exome Variant ServerCLUH
ExAC (Exome Aggregation Consortium)ENSG00000132361
GNOMAD BrowserENSG00000132361
Genetic variants : HAPMAP23277
Genomic Variants (DGV)CLUH [DGVbeta]
DECIPHERCLUH [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCLUH 
Mutations
ICGC Data PortalCLUH 
TCGA Data PortalCLUH 
Broad Tumor PortalCLUH
OASIS PortalCLUH [ Somatic mutations - Copy number]
Mutations and Diseases : HGMDCLUH
BioMutasearch CLUH
DgiDB (Drug Gene Interaction Database)CLUH
DoCM (Curated mutations)CLUH (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CLUH (select a term)
intoGenCLUH
Cancer3DCLUH(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616184   
Orphanet
MedgenCLUH
Genetic Testing Registry CLUH
NextProtO75153 [Medical]
TSGene23277
GENETestsCLUH
Target ValidationCLUH
Huge Navigator CLUH [HugePedia]
snp3D : Map Gene to Disease23277
BioCentury BCIQCLUH
ClinGenCLUH
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD23277
Chemical/Pharm GKB GenePA142671614
Clinical trialCLUH
Miscellaneous
canSAR (ICR)CLUH (select the gene name)
Probes
Litterature
PubMed15 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCLUH
EVEXCLUH
GoPubMedCLUH
iHOPCLUH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 11:42:53 CET 2017

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