Atlas of Genetics and Cytogenetics in Oncology and Haematology


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CLUH (clustered mitochondria homolog)

Identity

Alias (NCBI)CLU1
HGNC (Hugo) CLUH
HGNC Alias symbCLU1
HGNC Previous nameKIAA0664
HGNC Previous nameKIAA0664
 clustered mitochondria (cluA/CLU1) homolog
LocusID (NCBI) 23277
Atlas_Id 61912
Location 17p13.3  [Link to chromosome band 17p13]
Location_base_pair Starts at 2689387 and ends at 2711764 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
ABR (17p13.3) / CLUH (17p13.3)CLUH (17p13.3) / DLG5 (10q22.3)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CLUH   29094
Cards
Entrez_Gene (NCBI)CLUH    clustered mitochondria homolog
AliasesCLU1
GeneCards (Weizmann)CLUH
Ensembl hg19 (Hinxton)ENSG00000132361 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000132361 [Gene_View]  ENSG00000132361 [Sequence]  chr17:2689387-2711764 [Contig_View]  CLUH [Vega]
ICGC DataPortalENSG00000132361
TCGA cBioPortalCLUH
AceView (NCBI)CLUH
Genatlas (Paris)CLUH
SOURCE (Princeton)CLUH
Genetics Home Reference (NIH)CLUH
Genomic and cartography
GoldenPath hg38 (UCSC)CLUH  -     chr17:2689387-2711764 -  17p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CLUH  -     17p13.3   [Description]    (hg19-Feb_2009)
GoldenPathCLUH - 17p13.3 [CytoView hg19]  CLUH - 17p13.3 [CytoView hg38]
ImmunoBaseENSG00000132361
Genome Data Viewer NCBICLUH [Mapview hg19]  
OMIM616184   
Gene and transcription
Genbank (Entrez)AB014564 AK023003 AK074252 AK093541 AK125717
RefSeq transcript (Entrez)NM_001366661 NM_001366662 NM_015229
Consensus coding sequences : CCDS (NCBI)CLUH
Gene ExpressionCLUH [ NCBI-GEO ]   CLUH [ EBI - ARRAY_EXPRESS ]   CLUH [ SEEK ]   CLUH [ MEM ]
Gene Expression Viewer (FireBrowse)CLUH [ Firebrowse - Broad ]
GenevisibleExpression of CLUH in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)23277
GTEX Portal (Tissue expression)CLUH
Human Protein AtlasENSG00000132361-CLUH [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtO75153   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtO75153  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProO75153
PhosPhoSitePlusO75153
Domaine pattern : Prosite (Expaxy)CLU (PS51823)   
Domains : Interpro (EBI)CLU    CLU-central    CLU_dom    CLU_N    TPR-like_helical_dom_sf   
Domain families : Pfam (Sanger)CLU (PF13236)    CLU_N (PF15044)    eIF3_p135 (PF12807)   
Domain families : Pfam (NCBI)pfam13236    pfam15044    pfam12807   
Conserved Domain (NCBI)CLUH
SuperfamilyO75153
AlphaFold pdb e-kbO75153   
Human Protein Atlas [tissue]ENSG00000132361-CLUH [tissue]
HPRD10014
Protein Interaction databases
DIP (DOE-UCLA)O75153
IntAct (EBI)O75153
BioGRIDCLUH
STRING (EMBL)CLUH
ZODIACCLUH
Ontologies - Pathways
QuickGOO75153
Ontology : AmiGOmRNA binding  mRNA binding  cytoplasm  cytoplasm  mitochondrion organization  intracellular distribution of mitochondria  intracellular distribution of mitochondria  
Ontology : EGO-EBImRNA binding  mRNA binding  cytoplasm  cytoplasm  mitochondrion organization  intracellular distribution of mitochondria  intracellular distribution of mitochondria  
NDEx NetworkCLUH
Atlas of Cancer Signalling NetworkCLUH
Wikipedia pathwaysCLUH
Orthology - Evolution
OrthoDB23277
GeneTree (enSembl)ENSG00000132361
Phylogenetic Trees/Animal Genes : TreeFamCLUH
Homologs : HomoloGeneCLUH
Homology/Alignments : Family Browser (UCSC)CLUH
Gene fusions - Rearrangements
Fusion : QuiverCLUH
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCLUH [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CLUH
dbVarCLUH
ClinVarCLUH
MonarchCLUH
1000_GenomesCLUH 
Exome Variant ServerCLUH
GNOMAD BrowserENSG00000132361
Varsome BrowserCLUH
ACMGCLUH variants
VarityO75153
Genomic Variants (DGV)CLUH [DGVbeta]
DECIPHERCLUH [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCLUH 
Mutations
ICGC Data PortalCLUH 
TCGA Data PortalCLUH 
Broad Tumor PortalCLUH
OASIS PortalCLUH [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCLUH  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCLUH
Mutations and Diseases : HGMDCLUH
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCLUH
DgiDB (Drug Gene Interaction Database)CLUH
DoCM (Curated mutations)CLUH
CIViC (Clinical Interpretations of Variants in Cancer)CLUH
Cancer3DCLUH
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM616184   
Orphanet
DisGeNETCLUH
MedgenCLUH
Genetic Testing Registry CLUH
NextProtO75153 [Medical]
GENETestsCLUH
Target ValidationCLUH
Huge Navigator CLUH [HugePedia]
ClinGenCLUH
Clinical trials, drugs, therapy
MyCancerGenomeCLUH
Protein Interactions : CTDCLUH
Pharm GKB GenePA142671614
PharosO75153
Clinical trialCLUH
Miscellaneous
canSAR (ICR)CLUH
HarmonizomeCLUH
DataMed IndexCLUH
Probes
Litterature
PubMed33 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCLUH
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:46:20 CEST 2021

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