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CMIP (c-Maf inducing protein)

Identity

Alias (NCBI)TCMIP
HGNC (Hugo) CMIP
LocusID (NCBI) 80790
Atlas_Id 52816
Location 16q23.2  [Link to chromosome band 16q23]
Location_base_pair Starts at 81445170 and ends at 81711763 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CMIP (16q23.2) / BCO1 (16q23.2)CMIP (16q23.2) / CCDC183 (9q34.3)CMIP (16q23.2) / CDYL2 (16q23.2)
CMIP (16q23.2) / CMIP (16q23.2)CMIP (16q23.2) / COTL1 (16q24.1)CMIP (16q23.2) / DYNLRB2 (16q23.2)
CMIP (16q23.2) / SLC26A11 (17q25.3)CMIP (16q23.2) / SSBP1 (7q34)CMIP (16q23.2) / TPX2 (20q11.21)
KIAA1429 (8q22.1) / CMIP (16q23.2)NADK2 (5p13.2) / CMIP (16q23.2)CMIP 16q23.2 BCMO1
CMIP 16q23.2 / CDYL2 16q23.2

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CMIP   24319
Cards
Entrez_Gene (NCBI)CMIP    c-Maf inducing protein
AliasesTCMIP
GeneCards (Weizmann)CMIP
Ensembl hg19 (Hinxton)ENSG00000153815 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000153815 [Gene_View]  ENSG00000153815 [Sequence]  chr16:81445170-81711763 [Contig_View]  CMIP [Vega]
ICGC DataPortalENSG00000153815
TCGA cBioPortalCMIP
AceView (NCBI)CMIP
Genatlas (Paris)CMIP
SOURCE (Princeton)CMIP
Genetics Home Reference (NIH)CMIP
Genomic and cartography
GoldenPath hg38 (UCSC)CMIP  -     chr16:81445170-81711763 +  16q23.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CMIP  -     16q23.2   [Description]    (hg19-Feb_2009)
GoldenPathCMIP - 16q23.2 [CytoView hg19]  CMIP - 16q23.2 [CytoView hg38]
ImmunoBaseENSG00000153815
Genome Data Viewer NCBICMIP [Mapview hg19]  
OMIM610112   
Gene and transcription
Genbank (Entrez)AB051481 AK096598 AK127550 AK304418 AK308869
RefSeq transcript (Entrez)NM_030629 NM_198390
Consensus coding sequences : CCDS (NCBI)CMIP
Gene ExpressionCMIP [ NCBI-GEO ]   CMIP [ EBI - ARRAY_EXPRESS ]   CMIP [ SEEK ]   CMIP [ MEM ]
Gene Expression Viewer (FireBrowse)CMIP [ Firebrowse - Broad ]
GenevisibleExpression of CMIP in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)80790
GTEX Portal (Tissue expression)CMIP
Human Protein AtlasENSG00000153815-CMIP [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ8IY22   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ8IY22  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ8IY22
PhosPhoSitePlusQ8IY22
Domains : Interpro (EBI)LRR_dom_sf   
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CMIP
SuperfamilyQ8IY22
AlphaFold pdb e-kbQ8IY22   
Human Protein Atlas [tissue]ENSG00000153815-CMIP [tissue]
HPRD10839
Protein Interaction databases
DIP (DOE-UCLA)Q8IY22
IntAct (EBI)Q8IY22
BioGRIDCMIP
STRING (EMBL)CMIP
ZODIACCMIP
Ontologies - Pathways
QuickGOQ8IY22
Ontology : AmiGOin utero embryonic development  protein binding  nucleoplasm  nucleoplasm  cytosol  cytosol  
Ontology : EGO-EBIin utero embryonic development  protein binding  nucleoplasm  nucleoplasm  cytosol  cytosol  
NDEx NetworkCMIP
Atlas of Cancer Signalling NetworkCMIP
Wikipedia pathwaysCMIP
Orthology - Evolution
OrthoDB80790
GeneTree (enSembl)ENSG00000153815
Phylogenetic Trees/Animal Genes : TreeFamCMIP
Homologs : HomoloGeneCMIP
Homology/Alignments : Family Browser (UCSC)CMIP
Gene fusions - Rearrangements
Fusion : MitelmanCMIP/BCO1 [16q23.2/16q23.2]  
Fusion : MitelmanCMIP/CDYL2 [16q23.2/16q23.2]  
Fusion : QuiverCMIP
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCMIP [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CMIP
dbVarCMIP
ClinVarCMIP
MonarchCMIP
1000_GenomesCMIP 
Exome Variant ServerCMIP
GNOMAD BrowserENSG00000153815
Varsome BrowserCMIP
ACMGCMIP variants
VarityQ8IY22
Genomic Variants (DGV)CMIP [DGVbeta]
DECIPHERCMIP [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCMIP 
Mutations
ICGC Data PortalCMIP 
TCGA Data PortalCMIP 
Broad Tumor PortalCMIP
OASIS PortalCMIP [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCMIP  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCMIP
Mutations and Diseases : HGMDCMIP
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCMIP
DgiDB (Drug Gene Interaction Database)CMIP
DoCM (Curated mutations)CMIP
CIViC (Clinical Interpretations of Variants in Cancer)CMIP
Cancer3DCMIP
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM610112   
Orphanet
DisGeNETCMIP
MedgenCMIP
Genetic Testing Registry CMIP
NextProtQ8IY22 [Medical]
GENETestsCMIP
Target ValidationCMIP
Huge Navigator CMIP [HugePedia]
ClinGenCMIP
Clinical trials, drugs, therapy
MyCancerGenomeCMIP
Protein Interactions : CTDCMIP
Pharm GKB GenePA166048959
PharosQ8IY22
Clinical trialCMIP
Miscellaneous
canSAR (ICR)CMIP
HarmonizomeCMIP
DataMed IndexCMIP
Probes
Litterature
PubMed42 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCMIP
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Mon Oct 4 15:04:27 CEST 2021

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