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CNDP1 (carnosine dipeptidase 1)

Identity

Alias_namescarnosine dipeptidase 1 (metallopeptidase M20 family)
Alias_symbol (synonym)MGC10825
CN1
CPGL2
HsT2308
Other alias
HGNC (Hugo) CNDP1
LocusID (NCBI) 84735
Atlas_Id 46592
Location 18q22.3  [Link to chromosome band 18q22]
Location_base_pair Starts at 74534457 and ends at 74585026 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CNDP1   20675
Cards
Entrez_Gene (NCBI)CNDP1  84735  carnosine dipeptidase 1
AliasesCN1; CPGL2; HsT2308
GeneCards (Weizmann)CNDP1
Ensembl hg19 (Hinxton)ENSG00000150656 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000150656 [Gene_View]  chr18:74534457-74585026 [Contig_View]  CNDP1 [Vega]
ICGC DataPortalENSG00000150656
TCGA cBioPortalCNDP1
AceView (NCBI)CNDP1
Genatlas (Paris)CNDP1
WikiGenes84735
SOURCE (Princeton)CNDP1
Genetics Home Reference (NIH)CNDP1
Genomic and cartography
GoldenPath hg38 (UCSC)CNDP1  -     chr18:74534457-74585026 +  18q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CNDP1  -     18q22.3   [Description]    (hg19-Feb_2009)
EnsemblCNDP1 - 18q22.3 [CytoView hg19]  CNDP1 - 18q22.3 [CytoView hg38]
Mapping of homologs : NCBICNDP1 [Mapview hg19]  CNDP1 [Mapview hg38]
OMIM609064   
Gene and transcription
Genbank (Entrez)AJ417564 AK098369 AK131263 AK289916 AK303708
RefSeq transcript (Entrez)NM_032649
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CNDP1
Cluster EST : UnigeneHs.400613 [ NCBI ]
CGAP (NCI)Hs.400613
Alternative Splicing GalleryENSG00000150656
Gene ExpressionCNDP1 [ NCBI-GEO ]   CNDP1 [ EBI - ARRAY_EXPRESS ]   CNDP1 [ SEEK ]   CNDP1 [ MEM ]
Gene Expression Viewer (FireBrowse)CNDP1 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)84735
GTEX Portal (Tissue expression)CNDP1
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ96KN2   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ96KN2  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ96KN2
Splice isoforms : SwissVarQ96KN2
Catalytic activity : Enzyme3.4.13.20 [ Enzyme-Expasy ]   3.4.13.203.4.13.20 [ IntEnz-EBI ]   3.4.13.20 [ BRENDA ]   3.4.13.20 [ KEGG ]   
PhosPhoSitePlusQ96KN2
Domaine pattern : Prosite (Expaxy)ARGE_DAPE_CPG2_2 (PS00759)   
Domains : Interpro (EBI)ArgE/DapE_CS    CNDP/DUG1    Peptidase_M20    Peptidase_M20_dimer   
Domain families : Pfam (Sanger)M20_dimer (PF07687)    Peptidase_M20 (PF01546)   
Domain families : Pfam (NCBI)pfam07687    pfam01546   
Conserved Domain (NCBI)CNDP1
DMDM Disease mutations84735
Blocks (Seattle)CNDP1
PDB (SRS)3DLJ   
PDB (PDBSum)3DLJ   
PDB (IMB)3DLJ   
PDB (RSDB)3DLJ   
Structural Biology KnowledgeBase3DLJ   
SCOP (Structural Classification of Proteins)3DLJ   
CATH (Classification of proteins structures)3DLJ   
SuperfamilyQ96KN2
Human Protein AtlasENSG00000150656
Peptide AtlasQ96KN2
HPRD09883
IPIIPI00064667   
Protein Interaction databases
DIP (DOE-UCLA)Q96KN2
IntAct (EBI)Q96KN2
FunCoupENSG00000150656
BioGRIDCNDP1
STRING (EMBL)CNDP1
ZODIACCNDP1
Ontologies - Pathways
QuickGOQ96KN2
Ontology : AmiGOcarboxypeptidase activity  extracellular region  cytosol  proteolysis  metallopeptidase activity  dipeptidase activity  regulation of cellular protein metabolic process  metal ion binding  
Ontology : EGO-EBIcarboxypeptidase activity  extracellular region  cytosol  proteolysis  metallopeptidase activity  dipeptidase activity  regulation of cellular protein metabolic process  metal ion binding  
Pathways : KEGGArginine and proline metabolism    Histidine metabolism    beta-Alanine metabolism   
NDEx NetworkCNDP1
Atlas of Cancer Signalling NetworkCNDP1
Wikipedia pathwaysCNDP1
Orthology - Evolution
OrthoDB84735
GeneTree (enSembl)ENSG00000150656
Phylogenetic Trees/Animal Genes : TreeFamCNDP1
HOVERGENQ96KN2
HOGENOMQ96KN2
Homologs : HomoloGeneCNDP1
Homology/Alignments : Family Browser (UCSC)CNDP1
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCNDP1 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CNDP1
dbVarCNDP1
ClinVarCNDP1
1000_GenomesCNDP1 
Exome Variant ServerCNDP1
ExAC (Exome Aggregation Consortium)CNDP1 (select the gene name)
Genetic variants : HAPMAP84735
Genomic Variants (DGV)CNDP1 [DGVbeta]
DECIPHERCNDP1 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCNDP1 
Mutations
ICGC Data PortalCNDP1 
TCGA Data PortalCNDP1 
Broad Tumor PortalCNDP1
OASIS PortalCNDP1 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCNDP1  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCNDP1
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD - Leiden Open Variation Database
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CNDP1
DgiDB (Drug Gene Interaction Database)CNDP1
DoCM (Curated mutations)CNDP1 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CNDP1 (select a term)
intoGenCNDP1
Cancer3DCNDP1(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM609064   
Orphanet
MedgenCNDP1
Genetic Testing Registry CNDP1
NextProtQ96KN2 [Medical]
TSGene84735
GENETestsCNDP1
Target ValidationCNDP1
Huge Navigator CNDP1 [HugePedia]
snp3D : Map Gene to Disease84735
BioCentury BCIQCNDP1
ClinGenCNDP1
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD84735
Chemical/Pharm GKB GenePA134907547
Clinical trialCNDP1
Miscellaneous
canSAR (ICR)CNDP1 (select the gene name)
Probes
Litterature
PubMed43 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCNDP1
EVEXCNDP1
GoPubMedCNDP1
iHOPCNDP1
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Wed Jun 7 12:28:55 CEST 2017

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