Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

CNPY3-GNMT (CNPY3-GNMT readthrough)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 107080644
Atlas_Id 78196
Location 6p21.1  [Link to chromosome band 6p21]
Location_base_pair Starts at 42929130 and ends at 42963880 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)CNPY3-GNMT  107080644  CNPY3-GNMT readthrough
Aliases
GeneCards (Weizmann)CNPY3-GNMT
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:42929130-42963880 [Contig_View]  CNPY3-GNMT [Vega]
TCGA cBioPortalCNPY3-GNMT
AceView (NCBI)CNPY3-GNMT
Genatlas (Paris)CNPY3-GNMT
WikiGenes107080644
SOURCE (Princeton)CNPY3-GNMT
Genetics Home Reference (NIH)CNPY3-GNMT
Genomic and cartography
GoldenPath hg38 (UCSC)CNPY3-GNMT  -     chr6:42929130-42963880 +  6p21.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CNPY3-GNMT  -     6p21.1   [Description]    (hg19-Feb_2009)
EnsemblCNPY3-GNMT - 6p21.1 [CytoView hg19]  CNPY3-GNMT - 6p21.1 [CytoView hg38]
Mapping of homologs : NCBICNPY3-GNMT [Mapview hg19]  CNPY3-GNMT [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI074613 BQ947041 FY210916 FY213370 FY213777
RefSeq transcript (Entrez)NM_001318856 NM_001318857 NM_001318858
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CNPY3-GNMT
Cluster EST : UnigeneHs.144914 [ NCBI ]
CGAP (NCI)Hs.144914
Gene ExpressionCNPY3-GNMT [ NCBI-GEO ]   CNPY3-GNMT [ EBI - ARRAY_EXPRESS ]   CNPY3-GNMT [ SEEK ]   CNPY3-GNMT [ MEM ]
Gene Expression Viewer (FireBrowse)CNPY3-GNMT [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107080644
GTEX Portal (Tissue expression)CNPY3-GNMT
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)CNPY3-GNMT
DMDM Disease mutations107080644
Blocks (Seattle)CNPY3-GNMT
Protein Interaction databases
BioGRIDCNPY3-GNMT
STRING (EMBL)CNPY3-GNMT
ZODIACCNPY3-GNMT
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease107080644
BioCentury BCIQCNPY3-GNMT
ClinGenCNPY3-GNMT
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107080644
Clinical trialCNPY3-GNMT
Miscellaneous
canSAR (ICR)CNPY3-GNMT (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCNPY3-GNMT
EVEXCNPY3-GNMT
GoPubMedCNPY3-GNMT
iHOPCNPY3-GNMT
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 13:41:01 CEST 2018

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.