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CNST (consortin, connexin sorting protein)

Identity

Alias (NCBI)C1orf71
PPP1R64
HGNC (Hugo) CNST
HGNC Alias symbFLJ32001
PPP1R64
HGNC Alias nameprotein phosphatase 1, regulatory subunit 64
HGNC Previous nameC1orf71
HGNC Previous namechromosome 1 open reading frame 71
LocusID (NCBI) 163882
Atlas_Id 61956
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 246566456 and ends at 246668595 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
CNST (1q44) / CNST (1q44)CNST (1q44) / RGS7 (1q43)MSN (Xq12) / CNST (1q44)
SCCPDH (1q44) / CNST (1q44)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

 

Nomenclature
HGNC (Hugo)CNST   26486
Cards
Entrez_Gene (NCBI)CNST    consortin, connexin sorting protein
AliasesC1orf71; PPP1R64
GeneCards (Weizmann)CNST
Ensembl hg19 (Hinxton)ENSG00000162852 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000162852 [Gene_View]  ENSG00000162852 [Sequence]  chr1:246566456-246668595 [Contig_View]  CNST [Vega]
ICGC DataPortalENSG00000162852
TCGA cBioPortalCNST
AceView (NCBI)CNST
Genatlas (Paris)CNST
SOURCE (Princeton)CNST
Genetics Home Reference (NIH)CNST
Genomic and cartography
GoldenPath hg38 (UCSC)CNST  -     chr1:246566456-246668595 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CNST  -     1q44   [Description]    (hg19-Feb_2009)
GoldenPathCNST - 1q44 [CytoView hg19]  CNST - 1q44 [CytoView hg38]
ImmunoBaseENSG00000162852
Genome Data Viewer NCBICNST [Mapview hg19]  
OMIM613439   
Gene and transcription
Genbank (Entrez)AK056563 AK074142 AK091739 AL834246 BC010228
RefSeq transcript (Entrez)NM_001139459 NM_152609
Consensus coding sequences : CCDS (NCBI)CNST
Gene ExpressionCNST [ NCBI-GEO ]   CNST [ EBI - ARRAY_EXPRESS ]   CNST [ SEEK ]   CNST [ MEM ]
Gene Expression Viewer (FireBrowse)CNST [ Firebrowse - Broad ]
GenevisibleExpression of CNST in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)163882
GTEX Portal (Tissue expression)CNST
Human Protein AtlasENSG00000162852-CNST [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ6PJW8   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ6PJW8  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ6PJW8
PhosPhoSitePlusQ6PJW8
Domains : Interpro (EBI)Consortin    Consortin_C   
Domain families : Pfam (Sanger)Consortin_C (PF15281)   
Domain families : Pfam (NCBI)pfam15281   
Conserved Domain (NCBI)CNST
SuperfamilyQ6PJW8
AlphaFold pdb e-kbQ6PJW8   
Human Protein Atlas [tissue]ENSG00000162852-CNST [tissue]
HPRD08718
Protein Interaction databases
DIP (DOE-UCLA)Q6PJW8
IntAct (EBI)Q6PJW8
BioGRIDCNST
STRING (EMBL)CNST
ZODIACCNST
Ontologies - Pathways
QuickGOQ6PJW8
Ontology : AmiGOprotein binding  trans-Golgi network  trans-Golgi network  plasma membrane  plasma membrane  membrane  integral component of membrane  phosphatase binding  transport vesicle  transport vesicle  protein-containing complex  positive regulation of Golgi to plasma membrane protein transport  positive regulation of Golgi to plasma membrane protein transport  intracellular membrane-bounded organelle  connexin binding  connexin binding  
Ontology : EGO-EBIprotein binding  trans-Golgi network  trans-Golgi network  plasma membrane  plasma membrane  membrane  integral component of membrane  phosphatase binding  transport vesicle  transport vesicle  protein-containing complex  positive regulation of Golgi to plasma membrane protein transport  positive regulation of Golgi to plasma membrane protein transport  intracellular membrane-bounded organelle  connexin binding  connexin binding  
NDEx NetworkCNST
Atlas of Cancer Signalling NetworkCNST
Wikipedia pathwaysCNST
Orthology - Evolution
OrthoDB163882
GeneTree (enSembl)ENSG00000162852
Phylogenetic Trees/Animal Genes : TreeFamCNST
Homologs : HomoloGeneCNST
Homology/Alignments : Family Browser (UCSC)CNST
Gene fusions - Rearrangements
Fusion : QuiverCNST
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCNST [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CNST
dbVarCNST
ClinVarCNST
MonarchCNST
1000_GenomesCNST 
Exome Variant ServerCNST
GNOMAD BrowserENSG00000162852
Varsome BrowserCNST
ACMGCNST variants
VarityQ6PJW8
Genomic Variants (DGV)CNST [DGVbeta]
DECIPHERCNST [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCNST 
Mutations
ICGC Data PortalCNST 
TCGA Data PortalCNST 
Broad Tumor PortalCNST
OASIS PortalCNST [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCNST  [overview]  [genome browser]  [tissue]  [distribution]  
Somatic Mutations in Cancer : COSMIC3DCNST
Mutations and Diseases : HGMDCNST
LOVD (Leiden Open Variation Database)[gene] [transcripts] [variants]
BioMutaCNST
DgiDB (Drug Gene Interaction Database)CNST
DoCM (Curated mutations)CNST
CIViC (Clinical Interpretations of Variants in Cancer)CNST
Cancer3DCNST
Impact of mutations[PolyPhen2] [Provean] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM613439   
Orphanet
DisGeNETCNST
MedgenCNST
Genetic Testing Registry CNST
NextProtQ6PJW8 [Medical]
GENETestsCNST
Target ValidationCNST
Huge Navigator CNST [HugePedia]
ClinGenCNST
Clinical trials, drugs, therapy
MyCancerGenomeCNST
Protein Interactions : CTDCNST
Pharm GKB GenePA165751017
PharosQ6PJW8
Clinical trialCNST
Miscellaneous
canSAR (ICR)CNST
HarmonizomeCNST
DataMed IndexCNST
Probes
Litterature
PubMed30 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXCNST
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Oct 4 15:46:26 CEST 2021

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