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CNTD2 (cyclin N-terminal domain containing 2)

Identity

Alias_symbol (synonxm)<¯TD:FLJ13265
CCNP
Other alias
HGNC (Hugo) CNTD2
LocusID (NCBI) 79935
Atlas_Id 61958
Location 19q13.2  [Link to chromosome band 19q13]
Location_base_pair Starts at 40222208 and ends at 40226690 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2016)
CNTD2 (19q13.2) / CNTD2 (19q13.2)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)CNTD2   25805
Cards
Entrez_Gene (NCBI)CNTD2  79935  cyclin N-terminal domain containing 2
AliasesCCNP
GeneCards (Weizmann)CNTD2
Ensembl hg19 (Hinxton)ENSG00000105219 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000105219 [Gene_View]  chr19:40222208-40226690 [Contig_View]  CNTD2 [Vega]
ICGC DataPortalENSG00000105219
TCGA cBioPortalCNTD2
AceView (NCBI)CNTD2
Genatlas (Paris)CNTD2
WikiGenes79935
SOURCE (Princeton)CNTD2
Genetics Home Reference (NIH)CNTD2
Genomic and cartography
GoldenPath hg38 (UCSC)CNTD2  -     chr19:40222208-40226690 -  19q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)CNTD2  -     19q13.2   [Description]    (hg19-Feb_2009)
EnsemblCNTD2 - 19q13.2 [CytoView hg19]  CNTD2 - 19q13.2 [CytoView hg38]
Mapping of homologs : NCBICNTD2 [Mapview hg19]  CNTD2 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI924992 AK023327 AK301833 BM709160 BU732215
RefSeq transcript (Entrez)NM_024877
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)CNTD2
Cluster EST : UnigeneHs.631603 [ NCBI ]
CGAP (NCI)Hs.631603
Alternative Splicing GalleryENSG00000105219
Gene ExpressionCNTD2 [ NCBI-GEO ]   CNTD2 [ EBI - ARRAY_EXPRESS ]   CNTD2 [ SEEK ]   CNTD2 [ MEM ]
Gene Expression Viewer (FireBrowse)CNTD2 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)79935
GTEX Portal (Tissue expression)CNTD2
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ9H8S5   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ9H8S5  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ9H8S5
Splice isoforms : SwissVarQ9H8S5
PhosPhoSitePlusQ9H8S5
Domains : Interpro (EBI)Cyclin-like    Cyclin_N   
Domain families : Pfam (Sanger)Cyclin_N (PF00134)   
Domain families : Pfam (NCBI)pfam00134   
Domain families : Smart (EMBL)CYCLIN (SM00385)  
Conserved Domain (NCBI)CNTD2
DMDM Disease mutations79935
Blocks (Seattle)CNTD2
SuperfamilyQ9H8S5
Human Protein AtlasENSG00000105219
Peptide AtlasQ9H8S5
HPRD08581
IPIIPI00016428   IPI00940781   IPI00965097   
Protein Interaction databases
DIP (DOE-UCLA)Q9H8S5
IntAct (EBI)Q9H8S5
FunCoupENSG00000105219
BioGRIDCNTD2
STRING (EMBL)CNTD2
ZODIACCNTD2
Ontologies - Pathways
QuickGOQ9H8S5
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkCNTD2
Atlas of Cancer Signalling NetworkCNTD2
Wikipedia pathwaysCNTD2
Orthology - Evolution
OrthoDB79935
GeneTree (enSembl)ENSG00000105219
Phylogenetic Trees/Animal Genes : TreeFamCNTD2
HOVERGENQ9H8S5
HOGENOMQ9H8S5
Homologs : HomoloGeneCNTD2
Homology/Alignments : Family Browser (UCSC)CNTD2
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerCNTD2 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)CNTD2
dbVarCNTD2
ClinVarCNTD2
1000_GenomesCNTD2 
Exome Variant ServerCNTD2
ExAC (Exome Aggregation Consortium)CNTD2 (select the gene name)
Genetic variants : HAPMAP79935
Genomic Variants (DGV)CNTD2 [DGVbeta]
DECIPHERCNTD2 [patients]   [syndromes]   [variants]   [genes]  
CONAN: Copy Number AnalysisCNTD2 
Mutations
ICGC Data PortalCNTD2 
TCGA Data PortalCNTD2 
Broad Tumor PortalCNTD2
OASIS PortalCNTD2 [ Somatic mutations - Copy number]
Somatic Mutations in Cancer : COSMICCNTD2  [overview]  [genome browser]  [tissue]  [distribution]  
Mutations and Diseases : HGMDCNTD2
LOVD (Leiden Open Variation Database)Whole genome datasets
LOVD (Leiden Open Variation Database)LOVD 3.0 shared installation
BioMutasearch CNTD2
DgiDB (Drug Gene Interaction Database)CNTD2
DoCM (Curated mutations)CNTD2 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)CNTD2 (select a term)
intoGenCNTD2
Cancer3DCNTD2(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenCNTD2
Genetic Testing Registry CNTD2
NextProtQ9H8S5 [Medical]
TSGene79935
GENETestsCNTD2
Target ValidationCNTD2
Huge Navigator CNTD2 [HugePedia]
snp3D : Map Gene to Disease79935
BioCentury BCIQCNTD2
ClinGenCNTD2
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD79935
Chemical/Pharm GKB GenePA144596444
Clinical trialCNTD2
Miscellaneous
canSAR (ICR)CNTD2 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineCNTD2
EVEXCNTD2
GoPubMedCNTD2
iHOPCNTD2
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

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indexed on : Mon Sep 18 13:05:05 CEST 2017

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